RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MOCOSQ96EN8 888 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ZNF486Q96H40 463 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 FAR2Q96K12 515 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PGLYRP2Q96PD5 576 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TP63Q9H3D4 680 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 SNX15Q9NRS6 342 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 RGS18Q9NS28 235 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 MTMR10Q9NXD2 777 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CXXC1Q9P0U4 656 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 IFT80Q9P2H3 777 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TSPAN16Q9UKR8 245 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 SPEGQ15772 3267 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 A0A1W2PQ67 120 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TBKBP1A7MCY6 615 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PHGDHO43175 533 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 SOAT2O75908 522 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 MICAL2O94851 1124 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 UGT2B4P06133 528 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ENO2P09104 434 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 MBL2P11226 248 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TPSB2P20231 275 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CDH5P33151 784 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 BMPR1AP36894 532 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 GARSP41250 739 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PTPN9P43378 593 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CCR10P46092 362 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TAF6P49848 677 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 STILQ15468 1287 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TPSAB1Q15661 275 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PTPN20Q4JDL3 420 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 XKR4Q5GH76 650 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 C6orf10Q5SRN2 563 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 SH3PXD2AQ5TCZ1 1133 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 SDHAF4Q5VUM1 108 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CASC4Q6P4E1 433 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PLEKHG7Q6ZR37 379 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ANKRD33Q7Z3H0 272 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 PIWIL3Q7Z3Z3 882 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 DHFR2Q86XF0 187 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 S100ZQ8WXG8 99 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 C9orf16Q9BUW7 83 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CHST12Q9NRB3 414 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 THG1LQ9NWX6 298 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 GDAP2Q9NXN4 497 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 CD300AQ9UGN4 299 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 TBX21Q9UL17 535 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 USP18Q9UMW8 372 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 DGKBQ9Y6T7 804 aa10.14□□□□□ -0.79
HMGCLL1-205ENST00000398661 ILVBLA1L0T0 632 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 KMOO15229 486 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 NUAK1O60285 661 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 GABBR2O75899 941 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 ENDOD1O94919 500 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 PIGNO95427 931 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 LTFP02788 710 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 CLTBP09497 229 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 RPL17P18621 184 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 TFEBP19484 476 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 TFE3P19532 575 aaPredicted RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 CAPGP40121 348 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 NR4A2P43354 598 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 LEPRP48357 1165 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 AP3M2P53677 418 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 MPP1Q00013 466 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 NAB1Q13506 487 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 LRP8Q14114 963 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 SPCS2Q15005 226 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 ATP6AP1Q15904 470 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 CCNYL2Q5T2Q4 361 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 PMF1Q6P1K2 205 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 TTC23LQ6PF05 361 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 GLB1LQ6UWU2 654 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 KIAA2013Q8IYS2 634 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 CLIP4Q8N3C7 705 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 DHRSXQ8N5I4 330 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 OR2T34Q8NGX1 318 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 BCL7CQ8WUZ0 217 aaPredicted RBP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 STON2Q8WXE9 905 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 NRBF2Q96F24 287 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 SH3GL1Q99961 368 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 ATP13A3Q9H7F0 1226 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 VTI1BQ9UEU0 232 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 SARDHQ9UL12 918 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 PCDHGA3Q9Y5H0 932 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 VPS13AQ96RL7 3174 aa10.13□□□□□ -0.79
HMGCLL1-205ENST00000398661 FAM149AA5PLN7 773 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms