RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 C3orf62Q6ZUJ4 267 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 Q6ZVU0 165 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 CHPFQ8IZ52 775 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 KDM1BQ8NB78 822 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 TDRD1Q9BXT4 1180 aaKnown RBP13.29□□□□□ -0.28
SEC13-209ENST00000397117 SLC6A17Q9H1V8 727 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 ARNT2Q9HBZ2 717 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 CHKBQ9Y259 395 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 A0A087WUV0 522 aaPredicted RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 TTC34A8MYJ7 566 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SPAG6O75602 509 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 POP4O95707 220 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 ABHD2P08910 425 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 FTH1P19P0C7X4 201 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 PGAM1P18669 254 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SERPINA4P29622 427 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 CHRNA4P43681 627 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 GALNT3Q14435 633 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 GRM3Q14832 879 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 ARMC12Q5T9G4 340 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 C19orf48Q6RUI8 117 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 IQCKQ8N0W5 287 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 AGGF1Q8N302 714 aaeCLIP13.28□□□□□ -0.28
SEC13-209ENST00000397117 PPHLN1Q8NEY8 458 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 TUBGCP5Q96RT8 1024 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 CCDC77Q9BR77 488 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 WDR83Q9BRX9 315 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 EPB41L4BQ9H329 900 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 ZDHHC6Q9H6R6 413 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SUSD2Q9UGT4 822 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 GOLGA4Q13439 2230 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 URB1O60287 2271 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 LAMA5O15230 3695 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 CBFA2T3O75081 653 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SOCS5O75159 536 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 NDUFS2O75306 463 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 POLBP06746 335 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 GSTA2P09210 222 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 NUDT17P0C025 328 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 ATXN1LP0C7T5 689 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 MAOBP27338 520 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SSTR1P30872 391 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 CCNHP51946 323 aaPredicted RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 EPHB1P54762 984 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 EIF3BP55884 814 aaKnown RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 TRAF2Q12933 501 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SEPT6Q14141 434 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 POU6F1Q14863 301 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
SEC13-209ENST00000397117 PCID2Q5JVF3 399 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 DPY19L3Q6ZPD9 716 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 GLRX5Q86SX6 157 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 SLCO6A1Q86UG4 719 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 CAMK1DQ8IU85 385 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 NAXDQ8IW45 347 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 RGL4Q8IZJ4 473 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 PNPLA1Q8N8W4 532 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 LPCAT1Q8NF37 534 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 FRS2Q8WU20 508 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 DNASE2BQ8WZ79 361 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 NSMCE3Q96MG7 304 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 ZIM3Q96PE6 472 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 TRIB3Q96RU7 358 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
SEC13-209ENST00000397117 ASXL3Q9C0F0 2248 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 WASH3PC4AMC7 463 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 PIGNO95427 931 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 GKP32189 559 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 STX2P32856 288 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 GPX6P59796 221 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 GPS2Q13227 327 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 LAMB3Q13751 1172 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 WDR45BQ5MNZ6 344 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 UBAP2Q5T6F2 1119 aaKnown RBP13.27□□□□□ -0.29
SEC13-209ENST00000397117 ARMC3Q5W041 872 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 SERPINA13PQ6UXR4 307 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 PDZD3Q86UT5 571 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 OR2A12Q8NGT7 310 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 OR2W6PQ8NHA6 318 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
SEC13-209ENST00000397117 MYO19Q96H55 970 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 HEPHQ9BQS7 1158 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 CPEB1Q9BZB8 566 aaKnown RBP13.27□□□□□ -0.29
SEC13-209ENST00000397117 ZDHHC5Q9C0B5 715 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 CACNA2D2Q9NY47 1150 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 WSB2Q9NYS7 404 aaPredicted RBP13.27□□□□□ -0.29
SEC13-209ENST00000397117 RPS6KL1Q9Y6S9 549 aa13.27□□□□□ -0.29
SEC13-209ENST00000397117 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms