RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MUC3BQ9H195 1237 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 RETREG1Q9H6L5 497 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 TMEM248Q9NWD8 314 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 SAE1Q9UBE0 346 aaPredicted RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 IPO11Q9UI26 975 aaKnown RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 VPS51Q9UID3 782 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 MFHAS1Q9Y4C4 1052 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 FADS3Q9Y5Q0 445 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 TRPM6Q9BX84 2022 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 CXorf51AA0A1B0GTR3 108 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 ARHGAP42A6NI28 874 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 PDE2AO00408 941 aaPredicted RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 TOR1BO14657 336 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 RAD51BO15315 384 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 SPINT1O43278 529 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 MFSD11O43934 449 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 RAMP2O60895 175 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 LEFTY1O75610 366 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 LIPCP11150 499 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 ADRB3P13945 408 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 MX2P20592 715 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 SLC5A2P31639 672 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 RECQLP46063 649 aaPredicted RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 NR2C2P49116 596 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 GBE1Q04446 702 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 EIF2B5Q13144 721 aaKnown RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 POLD3Q15054 466 aaPredicted RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 DARS2Q6PI48 645 aaKnown RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
SEC13-205ENST00000397101 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 KLHL7Q8IXQ5 586 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 FBXO39Q8N4B4 442 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 CHST14Q8NCH0 376 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 FERMT1Q9BQL6 677 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 ARHGAP9Q9BRR9 750 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 SPON2Q9BUD6 331 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 C1QTNF2Q9BXJ5 285 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 TRIM4Q9C037 500 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 WASF2Q9Y6W5 498 aa13.74□□□□□ -0.21
SEC13-205ENST00000397101 RP1P56715 2156 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 CCDC188H7C350 402 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 K7ERQ8 282 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 RNF103O00237 685 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 PPP1R12AO14974 1030 aaPredicted RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 MUSKO15146 869 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 NVLO15381 856 aaKnown RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 TSPAN6O43657 245 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 SNAP91O60641 907 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 ZNF821O75541 412 aaPredicted RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 PECAM1P16284 738 aaPredicted RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 CCKBRP32239 447 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 NDST2P52849 883 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 YPEL5P62699 121 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 AP1B1Q10567 949 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 KLF1Q13351 362 aaPredicted RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 PDK1Q15118 436 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 C22orf39Q6P5X5 142 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 DPY19L3Q6ZPD9 716 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 PLPP6Q8IY26 295 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 ATG4AQ8WYN0 398 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 EXTL1Q92935 676 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 FRMD8P1Q9BZ68 369 aaPredicted RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 SLC39A8Q9C0K1 460 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 STRADBQ9C0K7 418 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 NDFIP2Q9NV92 336 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 APOBEC3BQ9UH17 382 aaKnown RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 PADI4Q9UM07 663 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 NEU3Q9UQ49 428 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
SEC13-205ENST00000397101 R3HDM2Q9Y2K5 976 aaKnown RBP13.73□□□□□ -0.21
SEC13-205ENST00000397101 RASA4BC9J798 803 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 RASA4O43374 803 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 PHF2O75151 1096 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 GCATO75600 419 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 UGT1A5P35504 534 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 ETFBP38117 255 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 PAPOLAP51003 745 aaKnown RBP13.72□□□□□ -0.21
SEC13-205ENST00000397101 YBEYP58557 167 aaPredicted RBP13.72□□□□□ -0.21
SEC13-205ENST00000397101 GNA12Q03113 381 aa13.72□□□□□ -0.21
SEC13-205ENST00000397101 SGCGQ13326 291 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms