RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 VIPR1P32241 457 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 GNPDA1P46926 289 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 POLD2P49005 469 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 RENBPP51606 427 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 TBR1Q16650 682 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 DENND2CQ68D51 928 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 SLC30A9Q6PML9 568 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 PIM3Q86V86 326 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 NAGSQ8N159 534 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 PDCD6IPQ8WUM4 868 aaKnown RBP13.26□□□□□ -0.29
RPA3-202ENST00000396682 CCDC74BQ96LY2 380 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 NUDCD1Q96RS6 583 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 MGME1Q9BQP7 344 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 GSDMCQ9BYG8 508 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 B3GNT4Q9C0J1 378 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 PHPT1Q9NRX4 125 aaPredicted RBP13.26□□□□□ -0.29
RPA3-202ENST00000396682 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 TRNAU1APQ9NX07 287 aaKnown RBP13.26□□□□□ -0.29
RPA3-202ENST00000396682 SLC17A4Q9Y2C5 497 aa13.26□□□□□ -0.29
RPA3-202ENST00000396682 LRRC53A6NM62 1247 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 PPM1DO15297 605 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 MAFKO60675 156 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 RNF8O76064 485 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 SOD1P00441 154 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 CPP00450 1065 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 FTLP02792 175 aaPredicted RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 FGF3P11487 239 aaPredicted RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 CD82P27701 267 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 CSF2RBP32927 897 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 MAXP61244 160 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 CTBSQ01459 385 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPA3-202ENST00000396682 ZNF235Q14590 738 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 STX1AQ16623 288 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 SMTNL2Q2TAL5 461 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 NKAIN2Q5VXU1 208 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 XKR5Q6UX68 686 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 RFLNAQ6ZTI6 216 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 Q6ZVL8 140 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 ZNF571Q7Z3V5 609 aaPredicted RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 LZTR1Q8N653 840 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 CNOT8Q9UFF9 292 aaKnown RBP13.25□□□□□ -0.29
RPA3-202ENST00000396682 MYO6Q9UM54 1294 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
RPA3-202ENST00000396682 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.297e-28■■■■■ 33.2
RPA3-202ENST00000396682 HGSO14964 777 aaPredicted RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 PGLSO95336 258 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 AMPD1P23109 780 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 TEAD1P28347 426 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 HSPA9P38646 679 aaKnown RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 ADCY8P40145 1251 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 GPR3P46089 330 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 CSRP3P50461 194 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 ZNF135P52742 658 aaPredicted RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 LIMK2P53671 638 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 CLCA4Q14CN2 919 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 RAET1GQ6H3X3 334 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 POLNQ7Z5Q5 900 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 TECPR1Q7Z6L1 1165 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 SCRN2Q96FV2 425 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 SCARF2Q96GP6 870 aaPredicted RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 SEMA3CQ99985 751 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 TMEM9Q9P0T7 183 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 PHTF1Q9UMS5 762 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
RPA3-202ENST00000396682 RELNP78509 3460 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 FLNCQ14315 2725 aa13.24□□□□□ -0.29
RPA3-202ENST00000396682 ZFC3H1O60293 1989 aaKnown RBP13.23□□□□□ -0.29
RPA3-202ENST00000396682 IGHV1OR21-1A0A087WYE8 117 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 GOLGA6CA6NDK9 693 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 GOLGA6BA6NDN3 693 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 STMND1H3BQB6 276 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 H3BRJ5 948 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 PSMD11O00231 422 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 SUV39H1O43463 412 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 IVLP07476 585 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 GOLGA6DP0CG33 693 aa13.23□□□□□ -0.29
RPA3-202ENST00000396682 THRAP10827 490 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms