RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 METTL21EPA6NDL7 271 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 BTNL10A8MVZ5 291 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 NRP2O60462 931 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CYP4F8P98187 520 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 RFTN2Q52LD8 501 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 METTL3Q86U44 580 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GSTCDQ8NEC7 633 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 KCTD4Q8WVF5 259 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 AIFM2Q9BRQ8 373 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ABCB9Q9NP78 766 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ADGRB3O60242 1522 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GIMD1P0DJR0 217 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PTGS2P35354 604 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 EML3Q32P44 896 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 OTOP1Q7RTM1 612 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF563Q8TA94 476 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 NCANO14594 1321 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ACKR2O00590 384 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 MPZL2O60487 215 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GATBO75879 557 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 HOXC6P09630 235 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CPTPQ5TA50 214 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 LRRC38Q5VT99 294 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CWF19L1Q69YN2 538 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 SCIMPQ6UWF3 145 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ACER1Q8TDN7 264 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 NAT14Q8WUY8 206 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 EBNA1BP2Q99848 306 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF670Q9BS34 389 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 XKRYO14609 159 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 IGFALSP35858 605 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF433Q8N7K0 673 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GFM1Q96RP9 751 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 SEC14L3Q9UDX4 400 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 TNFSF13BQ9Y275 285 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PCDHGB3Q9Y5G1 929 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CITO14578 2027 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 REM1O75628 298 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 SAGP10523 405 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PPM1LQ5SGD2 360 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 RNF31Q96EP0 1072 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 MRPL9Q9BYD2 267 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 KCNN2Q9H2S1 579 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GMIPQ9P107 970 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 MRTO4Q9UKD2 239 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 TMX2Q9Y320 296 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 TRAF6Q9Y4K3 522 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 TOP3BO95985 862 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 NELFEP18615 380 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 ATP13A5Q4VNC0 1218 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 TPGS1Q6ZTW0 290 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 GJD3Q8N144 294 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 CXorf40BQ96DE9 158 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 NKIRAS2Q9NYR9 191 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PDP1Q9P0J1 537 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 IFT80Q9P2H3 777 aaPredicted RBP13.97□□□□□ -0.17
COL4A3-202ENST00000396578 KCNE2Q9Y6J6 123 aa13.97□□□□□ -0.17
COL4A3-202ENST00000396578 PRH1P02810 166 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 NIPA1Q7RTP0 329 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 GPALPP1Q8IXQ4 340 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 REPS2Q8NFH8 660 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 OR2T12Q8NG77 320 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 LRRC20Q8TCA0 184 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 GPSM3Q9Y4H4 160 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 SLITRK3O94933 977 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 S100A2P29034 98 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 USP4Q13107 963 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 CACUL1Q86Y37 369 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 RFKQ969G6 155 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 DUSP9Q99956 384 aaKnown RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 STOX2Q9P2F5 926 aaPredicted RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 NFASCO94856 1347 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ABL2P42684 1182 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 SNAPC1Q16533 368 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 LPCAT4Q643R3 524 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 BEND5Q7L4P6 421 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 NXF3Q9H4D5 531 aaKnown RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ATP6AP2A0A1C7CYW4 349 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 H0Y858 1186 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ATP6AP2O75787 350 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 PTPRNQ16849 979 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF697Q5TEC3 545 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 THAP5Q7Z6K1 395 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
COL4A3-202ENST00000396578 OR10H5Q8NGA6 315 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 IFT46Q9NQC8 304 aa13.96□□□□□ -0.17
COL4A3-202ENST00000396578 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms