RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TFB2MQ9H5Q4 396 aaKnown RBP16.13■□□□□ 0.17
SNX6-202ENST00000396526 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
SNX6-202ENST00000396526 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
SNX6-202ENST00000396526 COMMD10Q9Y6G5 202 aa16.13■□□□□ 0.17
SNX6-202ENST00000396526 SYCE1LA8MT33 242 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 PEX11AO75192 247 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 PDHA1P08559 390 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 COX4I1P13073 169 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 EPHA3P29320 983 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 RPL26P61254 145 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 NAA20P61599 178 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 CYP4F8P98187 520 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 SATB1Q01826 763 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 CUL3Q13618 768 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 LSM12Q3MHD2 195 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 C1orf146Q5VVC0 180 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 TAS2R42Q7RTR8 314 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 RSRC1Q96IZ7 334 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 INSL6Q9Y581 213 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 RGSL1A5PLK6 1076 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 NEMP2A6NFY4 417 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 H0Y3Z8 333 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 ZMPSTE24O75844 475 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 PRLP01236 227 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 GFAPP14136 432 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 MC4RP32245 332 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 KPNB1Q14974 876 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 PTPRNQ16849 979 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 WLSQ5T9L3 541 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 Q6ZNB5 142 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 ISCA2Q86U28 154 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 RHEBL1Q8TAI7 183 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 ANKRD49Q8WVL7 239 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 PPP1R36Q96LQ0 422 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 OR52B2Q96RD2 323 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 TRMT6Q9UJA5 497 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 HTTP42858 3142 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 E5RI56 91 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 FGF19O95750 216 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 IGSF6O95976 241 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 ZNF37AP17032 561 aaPredicted RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 PLK1P53350 603 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 TRAF2Q12933 501 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 GEN1Q17RS7 908 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 ULK2Q8IYT8 1036 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 MAPK15Q8TD08 544 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 EXT2Q93063 718 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 SERPINI1Q99574 410 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 TMEM106CQ9BVX2 250 aa16.12■□□□□ 0.17
SNX6-202ENST00000396526 FNDC3AQ9Y2H6 1198 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 FCF1Q9Y324 198 aaKnown RBP16.12■□□□□ 0.17
SNX6-202ENST00000396526 GLUD1P00367 558 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 FGBP02675 491 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 PKMP14618 531 aaKnown RBP16.11■□□□□ 0.17
SNX6-202ENST00000396526 HNRNPLP14866 589 aaKnown RBP eCLIP16.11■□□□□ 0.176e-14■□□□□ 8.8
SNX6-202ENST00000396526 SUOXP51687 545 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 NAA25Q14CX7 972 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 PPM1LQ5SGD2 360 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 ATG14Q6ZNE5 492 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 ENDOVQ8N8Q3 282 aaKnown RBP16.11■□□□□ 0.17
SNX6-202ENST00000396526 KDM1BQ8NB78 822 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 PPFIBP2Q8ND30 876 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 MDGA1Q8NFP4 955 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 RP9Q8TA86 221 aaKnown RBP16.11■□□□□ 0.17
SNX6-202ENST00000396526 VWCEQ96DN2 955 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 RTKNQ9BST9 563 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 G3BP2Q9UN86 482 aaKnown RBP16.11■□□□□ 0.17
SNX6-202ENST00000396526 FIS1Q9Y3D6 152 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 GRID2O43424 1007 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 LILRB3O75022 631 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 CERS6Q6ZMG9 384 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 CUZD1Q86UP6 607 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 LSMEM2Q8N112 164 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 MYO19Q96H55 970 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 TACO1Q9BSH4 297 aaKnown RBP16.11■□□□□ 0.17
SNX6-202ENST00000396526 MAGEE1Q9HCI5 957 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 ACSS2Q9NR19 701 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 LHX3Q9UBR4 397 aa16.11■□□□□ 0.17
SNX6-202ENST00000396526 CCDC189A1A4V9 331 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 TRIM43BA6NCK2 446 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ZBTB14O43829 449 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 CD1DP15813 335 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 MAPRE2Q15555 327 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ARHGAP15Q53QZ3 475 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 PIM3Q86V86 326 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 FAM217AQ8IXS0 508 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ZNF557Q8N988 423 aaPredicted RBP16.1■□□□□ 0.17
SNX6-202ENST00000396526 TRIM43Q96BQ3 446 aaPredicted RBP16.1■□□□□ 0.17
SNX6-202ENST00000396526 TM6SF2Q9BZW4 377 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 FKBPLQ9UIM3 349 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 RNF112Q9ULX5 631 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 FAM50BQ9Y247 325 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.1■□□□□ 0.17
SNX6-202ENST00000396526 LCHNA4D1U4 455 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 GIPC1O14908 333 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms