RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 AGAP2Q99490 1192 aa16.15■□□□□ 0.18
CXCL12-206ENST00000395795 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
CXCL12-206ENST00000395795 RBM22Q9NW64 420 aaKnown RBP eCLIP16.15■□□□□ 0.18
CXCL12-206ENST00000395795 APPL1Q9UKG1 709 aa16.15■□□□□ 0.18
CXCL12-206ENST00000395795 SLC17A4Q9Y2C5 497 aa16.15■□□□□ 0.18
CXCL12-206ENST00000395795 PCYT1BQ9Y5K3 369 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-206ENST00000395795 RNF215Q9Y6U7 377 aa16.15■□□□□ 0.18
CXCL12-206ENST00000395795 FASNP49327 2511 aaKnown RBP16.15■□□□□ 0.18
CXCL12-206ENST00000395795 D6RAR5 112 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 CYP2A6P11509 494 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-206ENST00000395795 CCNB1P14635 433 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 STC1P52823 247 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 ZBTB17Q13105 803 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 COL9A2Q14055 689 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-206ENST00000395795 TCEAL1Q15170 157 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 DENND2CQ68D51 928 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 SLC9A4Q6AI14 798 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 TAF8Q7Z7C8 310 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 CLEC14AQ86T13 490 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 LSMEM2Q8N112 164 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 BBS5Q8N3I7 341 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 FAM46DQ8NEK8 389 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 WDR48Q8TAF3 677 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 SCAMP4Q969E2 229 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 HDAC11Q96DB2 347 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-206ENST00000395795 LYSMD1Q96S90 227 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 LGMNQ99538 433 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 POLR1EQ9GZS1 481 aaKnown RBP16.14■□□□□ 0.17
CXCL12-206ENST00000395795 AMACRQ9UHK6 382 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 PLEKHM1Q9Y4G2 1056 aa16.14■□□□□ 0.17
CXCL12-206ENST00000395795 UNC13CQ8NB66 2214 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 CAPN8A6NHC0 703 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ZNF487B1APH4 448 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 RRP8O43159 456 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 FGF1P05230 155 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 RPLP0P05388 317 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 KRT7P08729 469 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 KELP23276 732 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 AK4P27144 223 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 PCBP4P57723 403 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 B4GALNT1Q00973 533 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ZFP36L1Q07352 338 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 PPIDQ08752 370 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 TRIM14Q14142 442 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 SPIDRQ14159 915 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 MESDQ14696 234 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 C14orf28Q4W4Y0 310 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ADAMTSL4Q6UY14 1074 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 USP45Q70EL2 814 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ZNF438Q7Z4V0 828 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 SPRED1Q7Z699 444 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 NLRP8Q86W28 1048 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 ZNF248Q8NDW4 579 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 NSMCE1Q8WV22 266 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 SCG3Q8WXD2 468 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 TADA1Q96BN2 335 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 EID2BQ96D98 161 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 COX14Q96I36 57 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 OLFM3Q96PB7 478 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 LRRN3Q9H3W5 708 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 KCTD5Q9NXV2 234 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 CD84Q9UIB8 345 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 CNOT6Q9ULM6 557 aaKnown RBP16.13■□□□□ 0.17
CXCL12-206ENST00000395795 SUFUQ9UMX1 484 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 DOLKQ9UPQ8 538 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 SCN8AQ9UQD0 1980 aa16.13■□□□□ 0.17
CXCL12-206ENST00000395795 KCNK1O00180 336 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 B4GAT1O43505 415 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 IVLP07476 585 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 PNLIPP16233 465 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 GLB1P16278 677 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 PTMSP20962 102 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 MAZP56270 477 aaKnown RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 IFI35P80217 286 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 NR1D2Q14995 579 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 QPCTQ16769 361 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 TIGD7Q6NT04 549 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 LRRC69Q6ZNQ3 347 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 ZNF765Q7L2R6 523 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 VSIG1Q86XK7 387 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 CCNJLQ8IV13 435 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 SLITRK4Q8IW52 837 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 WDR36Q8NI36 951 aaKnown RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 PATE1Q8WXA2 126 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 NAF1Q96HR8 494 aaKnown RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 TRIB3Q96RU7 358 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 FOXP3Q9BZS1 431 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 PHPT1Q9NRX4 125 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 TRNAU1APQ9NX07 287 aaKnown RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 ATXN7L1Q9ULK2 861 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-206ENST00000395795 BPTFQ12830 3046 aa16.12■□□□□ 0.17
CXCL12-206ENST00000395795 CCDC187A0A096LP49 1063 aa16.11■□□□□ 0.17
CXCL12-206ENST00000395795 B4DGG1 531 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms