RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PDE10AQ9Y233 779 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 CCDC78A2IDD5 438 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 SLC15A5A6NIM6 579 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 INPP4BO15327 924 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 GRID2O43424 1007 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 VNN1O95497 513 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 EGFRP00533 1210 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 GCP02774 474 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 NCK1P16333 377 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 PSMA4P25789 261 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 COX10Q12887 443 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 TFDP2Q14188 446 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 PARP15Q460N3 678 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 SPRED1Q7Z699 444 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 RFX6Q8HWS3 928 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 ZHX1-C8orf76Q96EF9 292 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 SLC23A1Q9UHI7 598 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 RREB1Q92766 1687 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 H3BMM5 538 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 SYN3O14994 580 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 CAPN5O15484 640 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 ADRB2P07550 413 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 TSHRP16473 764 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 PRDX5P30044 214 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 LRPAP1P30533 357 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 SRP54P61011 504 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 IRF9Q00978 393 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 EMX1Q04741 257 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 POU5F1BQ06416 359 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 CYP51A1Q16850 503 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 PAMR1Q6UXH9 720 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 OR8H2Q8N162 312 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 OR8H1Q8NGG4 311 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 NODALQ96S42 347 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
SLC28A1-203ENST00000394573 MEIOCA2RUB1 952 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 CCDC154A6NI56 674 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 ARHGEF9O43307 516 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 PROS1P07225 676 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 TFEBP19484 476 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 DNAJB2P25686 324 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 PLEKHG6Q3KR16 790 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 ARL13AQ5H913 290 aaPredicted RBP12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 TPRG1LQ5T0D9 272 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 C16orf62Q7Z3J2 963 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 THAP5Q7Z6K1 395 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 UBE2J2Q8N2K1 259 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 CNTD1Q8N815 330 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 OR7D4Q8NG98 312 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 LGALS12Q96DT0 336 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 ITCHQ96J02 903 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 UROC1Q96N76 676 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 FIZ1Q96SL8 496 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 EYA3Q99504 573 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 STRA6Q9BX79 667 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 CD300AQ9UGN4 299 aa12.52□□□□□ -0.4
SLC28A1-203ENST00000394573 MRASO14807 208 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 EIF3DO15371 548 aaKnown RBP eCLIP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TLL1O43897 1013 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 TNFRSF21O75509 655 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CCNE2O96020 404 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 HLA-DRAP01903 254 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CYBBP04839 570 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 DEFA1P59665 94 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 DEFA3P59666 94 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 DAB2P98082 770 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 GHRHRQ02643 423 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 GPAT3Q53EU6 434 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 BSPRYQ5W0U4 402 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 OR8H3Q8N146 312 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 CLEC4FQ8N1N0 589 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 PJA1Q8NG27 643 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 FANK1Q8TC84 345 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 ASB12Q8WXK4 309 aa12.52□□□□□ -0.41
SLC28A1-203ENST00000394573 RADILQ96JH8 1075 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms