RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 UXTQ9UBK9 157 aaPredicted RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 NDUFAF1Q9Y375 327 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 PTGDR2Q9Y5Y4 395 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 PPP6CO00743 305 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TNPO2O14787 897 aaKnown RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 AKAP10O43572 662 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 ITGB1P05556 798 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 NME5P56597 212 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 PRMT9Q6P2P2 845 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 PHYKPLQ8IUZ5 450 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 FIBCD1Q8N539 461 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TFAP2CQ92754 450 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TMIGD2Q96BF3 282 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 SP110Q9HB58 689 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TMEM248Q9NWD8 314 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 GIMAP2Q9UG22 337 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 RSL24D1Q9UHA3 163 aaKnown RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 TLR6Q9Y2C9 796 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 LOC285095A0A1B0GVY8 99 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 MYADML2A6NDP7 307 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 CNTN5O94779 1100 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 SIX3O95343 332 aaPredicted RBP18.83■□□□□ 0.61
CBX1-202ENST00000393408 SLC2A3P11169 496 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 CDK4P11802 303 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 CAPN3P20807 821 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 TUBA4AP68366 448 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 ALFQ53S48 1182 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 PGBD5Q8N414 524 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 HM13Q8TCT9 377 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 TWIST2Q8WVJ9 160 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 PSMG2Q969U7 264 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 TBATAQ96M53 351 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 ZYG11BQ9C0D3 744 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 IL1RL2Q9HB29 575 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 MID1IP1Q9NPA3 183 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 SQORQ9Y6N5 450 aa18.83■□□□□ 0.61
CBX1-202ENST00000393408 AQP12BA6NM10 295 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 FXYD1O00168 92 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 AZIN1O14977 448 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 PIP5K1BO14986 540 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 MGEA5O60502 916 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 ZNF623O75123 536 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 FOXA1P55317 472 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 ATP6V0D1P61421 351 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 HPCAP84074 193 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 ACVR1Q04771 509 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 TNK2Q07912 1038 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 GRB7Q14451 532 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 OR4D1Q15615 310 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 AQP12AQ8IXF9 295 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 SLC15A3Q8IY34 581 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 MIER2Q8N344 545 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 MINDY1Q8N5J2 469 aa18.83■□□□□ 0.6
CBX1-202ENST00000393408 LRRC14BA6NHZ5 514 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 F8W810 466 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 UBXN8O00124 270 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 MTHFD2P13995 350 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 HSD17B1P14061 328 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 CDK9P50750 372 aaKnown RBP18.82■□□□□ 0.6
CBX1-202ENST00000393408 SUOXP51687 545 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 TUSC3Q13454 348 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 VPS26BQ4G0F5 336 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 KANK2Q63ZY3 851 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 GDF6Q6KF10 455 aaPredicted RBP18.82■□□□□ 0.6
CBX1-202ENST00000393408 RYBPQ8N488 228 aaPredicted RBP18.82■□□□□ 0.6
CBX1-202ENST00000393408 PACRGLQ8N7B6 248 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 MFSD2AQ8NA29 543 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 SUSD3Q96L08 255 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 SLC8A2Q9UPR5 921 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 GPR182O15218 404 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 MGAT3Q09327 533 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 MS4A13Q5J8X5 152 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 TBCELQ5QJ74 424 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 INTS11Q5TA45 600 aaKnown RBP18.82■□□□□ 0.6
CBX1-202ENST00000393408 MSANTD2Q6P1R3 559 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 SCN4BQ8IWT1 228 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 GPR150Q8NGU9 434 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 TRIM15Q9C019 465 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 TUBB1Q9H4B7 451 aa18.82■□□□□ 0.6
CBX1-202ENST00000393408 CLK4Q9HAZ1 481 aaKnown RBP18.82■□□□□ 0.6
CBX1-202ENST00000393408 PLXNA3P51805 1871 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SAC3D1A6NKF1 404 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 DLGAP1O14490 977 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 ANGPT2O15123 496 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 HNRNPRO43390 633 aaKnown RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 MATN4O95460 622 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 GLP2RO95838 553 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 GOT2P00505 430 aaKnown RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 OR4Q2P0C623 313 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 ZNF37AP17032 561 aaPredicted RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 TBX4P57082 545 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 ILF2Q12905 390 aaKnown RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 SEMA3AQ14563 771 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SPRYD7Q5W111 196 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 LCN8Q6JVE9 175 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 RAB44Q7Z6P3 723 aaPredicted RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 EPHX4Q8IUS5 362 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 FAM47BQ8NA70 645 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 NSUN5Q96P11 429 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms