RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 RIOK2Q9BVS4 552 aaKnown RBP9.9□□□□□ -0.83
VLDLR-203ENST00000382100 UCK2Q9BZX2 261 aa9.9□□□□□ -0.83
VLDLR-203ENST00000382100 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.83
VLDLR-203ENST00000382100 DAGLAQ9Y4D2 1042 aa9.9□□□□□ -0.83
VLDLR-203ENST00000382100 PCNX1Q96RV3 2341 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 HOXB9P17482 250 aaPredicted RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RORCP51449 518 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 LIN52Q52LA3 116 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GTF2IRD2BQ6EKJ0 949 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DEF8Q6ZN54 512 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GTF2IRD2Q86UP8 949 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TERB2Q8NHR7 220 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 LY9Q9HBG7 655 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 KLHL33A6NCF5 533 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DCDC2CA8MYV0 355 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RPLP0P05388 317 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 MMP13P45452 471 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DSG2Q14126 1118 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 KIF2BQ8N4N8 673 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 IPMKQ8NFU5 416 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 BCL2L14Q9BZR8 327 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 IGSF6O95976 241 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ECT2LQ008S8 904 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ARHGAP36Q6ZRI8 547 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ZNF709Q8N972 641 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 FBXO36Q8NEA4 188 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CEP76Q8TAP6 659 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 EBNA1BP2Q99848 306 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CNPPD1Q9BV87 410 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 FNDC11Q9BVV2 318 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CCDC106Q9BWC9 280 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 HEG1Q9ULI3 1381 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 LTA4HP09960 611 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 HOXC12P31275 282 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RNASEH2BQ5TBB1 312 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 OR2T34Q8NGX1 318 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 OR2T3Q8NH03 318 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DIRAS2Q96HU8 199 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ZNF285Q96NJ3 590 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SEZ6LQ9BYH1 1024 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 WDCPQ9H6R7 721 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ROS1P08922 2347 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TM7SF2O76062 418 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TRIM32Q13049 653 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GRAPQ13588 217 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 AADACL4Q5VUY2 407 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 NECAB2Q7Z6G3 386 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 UNC93AQ86WB7 457 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GPSM1Q86YR5 675 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ARHGAP12Q8IWW6 846 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 REPS2Q8NFH8 660 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GRAPLQ8TC17 118 aaPredicted RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 FATE1Q969F0 183 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RAB11FIP5Q9BXF6 653 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 WASHC1A8K0Z3 465 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 WASH3PC4AMC7 463 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 LRRTM2O43300 516 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SLC15A1P46059 708 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CENPAP49450 140 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 RTP1P59025 263 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SREBF2Q12772 1141 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 WASH2PQ6VEQ5 465 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DCDC5Q6ZRR9 648 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 GRAMD1CQ8IYS0 662 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TCTEX1D2Q8WW35 142 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 DNAJC1Q96KC8 554 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 KATNBL1Q9H079 304 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 NYAP2Q9P242 653 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 WASF3Q9UPY6 502 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 PCDHA11Q9Y5I1 949 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ROBO3Q96MS0 1386 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 CASKO14936 926 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SEC24BO95487 1268 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 MT-CO2P00403 227 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TFRCP02786 760 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 MAGEA6P43360 314 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 NOMO3P69849 1222 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 NOMO1Q15155 1222 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SPESP1Q6UW49 350 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SLCO6A1Q86UG4 719 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SLC15A3Q8IY34 581 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SMG7Q92540 1137 aaKnown RBP9.89□□□□□ -0.83
VLDLR-203ENST00000382100 SPATA13Q96N96 652 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 TLR10Q9BXR5 811 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 MMP27Q9H306 513 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ATP13A1Q9HD20 1204 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 ABCB10Q9NRK6 738 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 PCDHA6Q9UN73 950 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 PCDHA8Q9Y5H6 950 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
VLDLR-203ENST00000382100 AQP12BA6NM10 295 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms