RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RPS6KA3P51812 740 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 IL10RBQ08334 325 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 DSC3Q14574 896 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 DDR2Q16832 855 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 DDIASQ8IXT1 998 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ALDH16A1Q8IZ83 802 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 MYO1HQ8N1T3 1032 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ANKFN1Q8N957 763 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 GPR150Q8NGU9 434 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 BLOC1S5Q8TDH9 187 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ZUFSPQ96AP4 578 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 TADA1Q96BN2 335 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 SLC29A1Q99808 456 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ARMC1Q9NVT9 282 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 RAMP2O60895 175 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 TIPRLO75663 272 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 SPATA31D3P0C874 917 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 PBX3P40426 434 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 NME5P56597 212 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 TAF1CQ15572 869 aaPredicted RBP16.31■□□□□ 0.2
VPS16-203ENST00000380469 PFKFB4Q16877 469 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 PITRM1Q5JRX3 1037 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ZNF549Q6P9A3 640 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 SPATA31D4Q6ZUB0 917 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 CARM1Q86X55 608 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 SH3RF2Q8TEC5 729 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 TWIST2Q8WVJ9 160 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 PEX13Q92968 403 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 BTN2A3PQ96KV6 586 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 SEMA3CQ99985 751 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 POLR1EQ9GZS1 481 aaKnown RBP16.31■□□□□ 0.2
VPS16-203ENST00000380469 IL1RL2Q9HB29 575 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 POPDC3Q9HBV1 291 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 MYRFQ9Y2G1 1151 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ARL5AQ9Y689 179 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 TTC3P53804 2025 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 IGLV3-10A0A075B6K4 115 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 UBXN8O00124 270 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 PIP5K1BO14986 540 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 H6PDO95479 791 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 FGF1P05230 155 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 BMP2P12643 396 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 GFAPP14136 432 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 HLA-DPA1P20036 260 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 ACVR1Q04771 509 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 PPP4R4Q6NUP7 873 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 RHEBL1Q8TAI7 183 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 CANT1Q8WVQ1 401 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 DNAJC1Q96KC8 554 aaKnown RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 GPATCH1Q9BRR8 931 aaKnown RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 PNPLA3Q9NST1 481 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 CATSPERZQ9NTU4 200 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 GID8Q9NWU2 228 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 GMIPQ9P107 970 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 CCDC162PA2VCL2 907 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 HTRA2O43464 458 aaPredicted RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 CELF2O95319 508 aaKnown RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 SIX3O95343 332 aaPredicted RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 PRKCQQ04759 706 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 INPP5AQ14642 412 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 OR4D1Q15615 310 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 PARP15Q460N3 678 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 VPS26BQ4G0F5 336 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 FAM219BQ5XKK7 198 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 RAP1GAP2Q684P5 730 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 FBXL22Q6P050 247 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 IGSF8Q969P0 613 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 FEM1CQ96JP0 617 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 C8orf48Q96LL4 319 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 TCF12Q99081 682 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 TFB2MQ9H5Q4 396 aaKnown RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 CAAP1Q9H8G2 361 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 CCM2LQ9NUG4 571 aaPredicted RBP16.3■□□□□ 0.2
VPS16-203ENST00000380469 MAP10Q9P2G4 905 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 ATXN10Q9UBB4 475 aa16.3■□□□□ 0.2
VPS16-203ENST00000380469 AQP12BA6NM10 295 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 HNRNPRO43390 633 aaKnown RBP16.29■□□□□ 0.2
VPS16-203ENST00000380469 TMCC1O94876 653 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ZNF37AP17032 561 aaPredicted RBP16.29■□□□□ 0.2
VPS16-203ENST00000380469 LBPP18428 481 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 IL10P22301 178 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 GPR15P49685 360 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 SUOXP51687 545 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 SERINC3Q13530 473 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ZNF235Q14590 738 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 LPIN1Q14693 890 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 KANK2Q63ZY3 851 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ERMP1Q7Z2K6 904 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 AQP12AQ8IXF9 295 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms