RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PMM1Q92871 262 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 EMID1Q96A84 441 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 RCN3Q96D15 328 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 MCRS1Q96EZ8 462 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 WDR41Q9HAD4 459 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SPC25Q9HBM1 224 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF302Q9NR11 478 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 INTS7Q9NVH2 962 aaKnown RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 DNPEPQ9ULA0 475 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PTP4A3O75365 173 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SERPINI2O75830 405 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 INHBAP08476 426 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 POU3F3P20264 500 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ITGALP20701 1170 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ARCN1P48444 511 aaKnown RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ARHGDIBP52566 201 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 MAPK12P53778 367 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 ABCE1P61221 599 aaKnown RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 S100A12P80511 92 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 NLGN4XQ8N0W4 816 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 METTL4Q8N3J2 472 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SEPT8Q92599 483 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SAMD11Q96NU1 681 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 TWNKQ96RR1 684 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SORT1Q99523 831 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PITHD1Q9GZP4 211 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SPATC1LQ9H0A9 340 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PCDHAC1Q9H158 963 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SLC6A17Q9H1V8 727 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 DSN1Q9H410 356 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SP110Q9HB58 689 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 SYBUQ9NX95 663 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 FBXL12Q9NXK8 326 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 CYB5R1Q9UHQ9 305 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 PCDHGC3Q9UN70 934 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 RAD54BQ9Y620 910 aa7.49□□□□□ -1.21
CDKL5-201ENST00000379989 H3BMM5 538 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GPR25O00155 361 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SEC24AO95486 1093 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TOP3BO95985 862 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GSRP00390 522 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 IFNA14P01570 189 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 IFNA16P05015 189 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ITGB3P05106 788 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 RALBP11234 206 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CYP2A6P11509 494 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 MYCLP12524 364 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 BMP2P12643 396 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PCSK2P16519 638 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ARRB2P32121 409 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CSTF2P33240 577 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ARL2P36404 184 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GARSP41250 739 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SLC1A6P48664 564 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 C2CD6Q53TS8 623 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ANKRD22Q5VYY1 191 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 MBLAC2Q68D91 279 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SYCE2Q6PIF2 218 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 DPY19L3Q6ZPD9 716 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 LRRTM3Q86VH5 581 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 NT5DC4Q86YG4 428 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PALM2Q8IXS6 379 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PM20D2Q8IYS1 436 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 LMO3Q8TAP4 145 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PHF10Q8WUB8 498 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PPWD1Q96BP3 646 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ASB9Q96DX5 294 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 NT5C1BQ96P26 610 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 RBM14Q96PK6 669 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ACO2Q99798 780 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 KIFC1Q9BW19 673 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 YTHDF1Q9BYJ9 559 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ROGDIQ9GZN7 287 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF556Q9HAH1 456 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 MRPS7Q9Y2R9 242 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 LIASO43766 372 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 RFPL1O75677 317 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 VAPBO95292 243 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CCNE2O96020 404 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CALB1P05937 261 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CYP2C8P10632 490 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ELK4P28324 431 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 IL12AP29459 219 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 SLC7A1P30825 629 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TRIM23P36406 574 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ERVK-21P61565 698 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CD83Q01151 205 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF267Q14586 743 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 PLCL1Q15111 1095 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 TARBP2Q15633 366 aaKnown RBP7.48□□□□□ -1.21
CDKL5-201ENST00000379989 DGUOKQ16854 277 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 CCNYL2Q5T2Q4 361 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 GARNL3Q5VVW2 1013 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 BROXQ5VW32 411 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ADCK1Q86TW2 530 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 ARHGEF19Q8IW93 802 aa7.48□□□□□ -1.21
CDKL5-201ENST00000379989 FAM71AQ8IYT1 594 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms