RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 YBEYP58557 167 aaPredicted RBP18.18■□□□□ 0.5
TDP2-202ENST00000378198 ACBD5Q5T8D3 534 aaPredicted RBP18.18■□□□□ 0.5
TDP2-202ENST00000378198 RAP1GAP2Q684P5 730 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 CYP2R1Q6VVX0 501 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 B3GNT6Q6ZMB0 384 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 SNX31Q8N9S9 440 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 TFB2MQ9H5Q4 396 aaKnown RBP18.18■□□□□ 0.5
TDP2-202ENST00000378198 MID1IP1Q9NPA3 183 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 OLA1Q9NTK5 396 aaKnown RBP18.18■□□□□ 0.5
TDP2-202ENST00000378198 RIMKLBQ9ULI2 386 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 DMTF1Q9Y222 760 aa18.18■□□□□ 0.5
TDP2-202ENST00000378198 ARHGAP10A1A4S6 786 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 AZIN1O14977 448 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 CSPG5O95196 566 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 CYBAP13498 195 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 ZNF37AP17032 561 aaPredicted RBP18.17■□□□□ 0.5
TDP2-202ENST00000378198 TIAL1Q01085 375 aaKnown RBP eCLIP18.17■□□□□ 0.5
TDP2-202ENST00000378198 BORAQ6PGQ7 559 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 KLHDC10Q6PID8 442 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 ISLR2Q6UXK2 745 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 RYBPQ8N488 228 aaPredicted RBP18.17■□□□□ 0.5
TDP2-202ENST00000378198 OR2T34Q8NGX1 318 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 OR2T3Q8NH03 318 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 BRSK1Q8TDC3 778 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 SH3RF2Q8TEC5 729 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 EXT2Q93063 718 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 RBM38Q9H0Z9 239 aaKnown RBP18.17■□□□□ 0.5
TDP2-202ENST00000378198 ARMC1Q9NVT9 282 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 CNOT6Q9ULM6 557 aaKnown RBP18.17■□□□□ 0.5
TDP2-202ENST00000378198 PCDHB5Q9Y5E4 795 aa18.17■□□□□ 0.5
TDP2-202ENST00000378198 MANSC4A6NHS7 340 aaPredicted RBP18.16■□□□□ 0.5
TDP2-202ENST00000378198 MYLK3Q32MK0 819 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 KANK2Q63ZY3 851 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 HMBOX1Q6NT76 420 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 ALDH16A1Q8IZ83 802 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 BLOC1S5Q8TDH9 187 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 TWIST2Q8WVJ9 160 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MPP4Q96JB8 637 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 DNAJC1Q96KC8 554 aaKnown RBP18.16■□□□□ 0.5
TDP2-202ENST00000378198 GPATCH1Q9BRR8 931 aaKnown RBP18.16■□□□□ 0.5
TDP2-202ENST00000378198 HAUS8Q9BT25 410 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 CATSPERZQ9NTU4 200 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 IL37Q9NZH6 218 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 CCDC162PA2VCL2 907 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 TMEM189-UBE2V1I3L0A0 370 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 GRK4P32298 578 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MAGEA11P43364 429 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MAPKAPK2P49137 400 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 NKX3-2P78367 333 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 ZNF235Q14590 738 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 GEN1Q17RS7 908 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MTX3Q5HYI7 312 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 RETREG3Q86VR2 466 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MIER2Q8N344 545 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MINDY1Q8N5J2 469 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 ANKFN1Q8N957 763 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 OR4L1Q8NH43 312 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 RPRD1AQ96P16 312 aaPredicted RBP18.16■□□□□ 0.5
TDP2-202ENST00000378198 ATOH8Q96SQ7 321 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 AARSD1Q9BTE6 412 aaKnown RBP18.16■□□□□ 0.5
TDP2-202ENST00000378198 SYTL2Q9HCH5 934 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 MAP10Q9P2G4 905 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 THEGQ9P2T0 379 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 ABCD2Q9UBJ2 740 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 RNF11Q9Y3C5 154 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 ARL5AQ9Y689 179 aa18.16■□□□□ 0.5
TDP2-202ENST00000378198 BPTFQ12830 3046 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 ANKRD33BA6NCL7 494 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 CCDC160A6NGH7 325 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 UBXN8O00124 270 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 NR5A2O00482 541 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 PIP5K1BO14986 540 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 PRAMEF11O60813 436 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 MATN4O95460 622 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 MTHFD2P13995 350 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 LBPP18428 481 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 OR1E1P30953 314 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 SEMA3AQ14563 771 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 OR4D1Q15615 310 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 AMIGO2Q86SJ2 522 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 CARM1Q86X55 608 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 ZNF280BQ86YH2 543 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 ZFP28Q8NHY6 868 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.15■□□□□ 0.5
TDP2-202ENST00000378198 CYP2S1Q96SQ9 504 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 TRIM15Q9C019 465 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 NOL11Q9H8H0 719 aaKnown RBP18.15■□□□□ 0.5
TDP2-202ENST00000378198 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
TDP2-202ENST00000378198 MARCH2Q9P0N8 246 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 AK5Q9Y6K8 562 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 CHD5Q8TDI0 1954 aa18.15■□□□□ 0.5
TDP2-202ENST00000378198 FAM92AA1XBS5 289 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 AQP12BA6NM10 295 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 ANGPT2O15123 496 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 VPS4BO75351 444 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 SIX3O95343 332 aaPredicted RBP18.14■□□□□ 0.5
TDP2-202ENST00000378198 BMP2P12643 396 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 STC1P52823 247 aa18.14■□□□□ 0.5
TDP2-202ENST00000378198 INHBEP58166 350 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms