RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TACR2P21452 398 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 RBM23Q86U06 439 aaKnown RBP15.03■□□□□ -0
NPHP4-201ENST00000378156 OR6K2Q8NGY2 324 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 FIZ1Q96SL8 496 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 CCDC28BQ9BUN5 200 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ZSCAN32Q9NX65 697 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 KLHL28Q9NXS3 571 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 DTLQ9NZJ0 730 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 PTPRJQ12913 1337 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ULK1O75385 1050 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 HPGDP15428 266 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ALOX12P18054 663 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 SP100P23497 879 aaPredicted RBP15.03■□□□□ -0
NPHP4-201ENST00000378156 CCNCP24863 283 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 MC4RP32245 332 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ACLYP53396 1101 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 RABGGTBP53611 331 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 MAPK11Q15759 364 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 GPR158Q5T848 1215 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ZDHHC13Q8IUH4 622 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 TMEM132CQ8N3T6 1108 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 STARD8Q92502 1023 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 DEPDC7Q96QD5 511 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 FAM25AB3EWG3 89 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 FAM25CB3EWG5 89 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 FAM25GB3EWG6 89 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 GSTM1P09488 218 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 PRMT2P55345 433 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 SOWAHAQ2M3V2 549 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 RFWD3Q6PCD5 774 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 SCIMPQ6UWF3 145 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 CYP4Z2PQ8N1L4 340 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 AZIN2Q96A70 460 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 MTFMTQ96DP5 389 aaKnown RBP15.03■□□□□ -0
NPHP4-201ENST00000378156 TMEM216Q9P0N5 145 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 SNX6Q9UNH7 406 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 EME2A4GXA9 379 aaPredicted RBP15.03■□□□□ -0
NPHP4-201ENST00000378156 YJEFN3A6XGL0 299 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 SQLEQ14534 574 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 RBFAQ8N0V3 343 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 NPAS2Q99743 824 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 TAS2R1Q9NYW7 299 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 CLIC5Q9NZA1 410 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 BTRCQ9Y297 605 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 BTBD3Q9Y2F9 522 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 KLHL20Q9Y2M5 609 aa15.03■□□□□ -0
NPHP4-201ENST00000378156 ANKDD1BA6NHY2 528 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 ECHS1P30084 290 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 XIAPP98170 497 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 PEX6Q13608 980 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 AAGABQ6PD74 315 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 C10orf53Q8N6V4 93 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 TSPAN14Q8NG11 270 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 MAGEC1O60732 1142 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 AP2A1O95782 977 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 GRIA1P42261 906 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 SULT2A1Q06520 285 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 ITGADQ13349 1161 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 MSS51Q4VC12 460 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 TIGD5Q53EQ6 642 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 MPPE1Q53F39 396 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 C6orf89Q6UWU4 347 aa15.02■□□□□ -0
NPHP4-201ENST00000378156 TAF4O00268 1085 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 TRIM38O00635 465 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 FTH1P02794 183 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 ANXA6P08133 673 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 CAPZA2P47755 286 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 GPX6P59796 221 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 KLHL12Q53G59 568 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 USP39Q53GS9 565 aaKnown RBP15.02□□□□□ -0.01
NPHP4-201ENST00000378156 C1orf220Q5T0J3 134 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 TTC23Q5W5X9 447 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 IKBIPQ70UQ0 350 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 AMIGO2Q86SJ2 522 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 CDYL2Q8N8U2 506 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 SPATA22Q8NHS9 363 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 DNAJB14Q8TBM8 379 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 BBS4Q96RK4 519 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 MBD2Q9UBB5 411 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 RSL24D1Q9UHA3 163 aaKnown RBP15.02□□□□□ -0.01
NPHP4-201ENST00000378156 DUSP12Q9UNI6 340 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 SNX10Q9Y5X0 201 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 PHRF1Q9P1Y6 1649 aaKnown RBP15.02□□□□□ -0.01
NPHP4-201ENST00000378156 KCNU1A8MYU2 1149 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 FAM220BPB1ANY3 271 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 ACSL4O60488 711 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 NDST3O95803 873 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 CAPN1P07384 714 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 COX10Q12887 443 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 GRM3Q14832 879 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 FAM151BQ6UXP7 276 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 CHPFQ8IZ52 775 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 SPAG4Q9NPE6 437 aa15.02□□□□□ -0.01
NPHP4-201ENST00000378156 TUBA8Q9NY65 449 aaPredicted RBP15.02□□□□□ -0.01
NPHP4-201ENST00000378156 NAT16Q8N8M0 369 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 DCAKDQ8WVC6 231 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 C7orf43Q8WVR3 580 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 HDHD2Q9H0R4 259 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms