RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TWIST2Q8WVJ9 160 aa18■□□□□ 0.47
GNE-201ENST00000377902 TANKQ92844 425 aa18■□□□□ 0.47
GNE-201ENST00000377902 ZUFSPQ96AP4 578 aa18■□□□□ 0.47
GNE-201ENST00000377902 LRRC58Q96CX6 371 aa18■□□□□ 0.47
GNE-201ENST00000377902 KLHL5Q96PQ7 755 aa18■□□□□ 0.47
GNE-201ENST00000377902 TBC1D13Q9NVG8 400 aa18■□□□□ 0.47
GNE-201ENST00000377902 POLR3BQ9NW08 1133 aaPredicted RBP18■□□□□ 0.47
GNE-201ENST00000377902 ZNF236Q9UL36 1845 aa18■□□□□ 0.47
GNE-201ENST00000377902 TRIP12Q14669 1992 aaPredicted RBP18■□□□□ 0.47
GNE-201ENST00000377902 UBXN8O00124 270 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TREHO43280 583 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 GJB3O75712 270 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 PFKFB4Q16877 469 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 PYCR3Q53H96 274 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 PTGR2Q8N8N7 351 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 GFM2Q969S9 779 aaKnown RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 TUBGCP3Q96CW5 907 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 MYRFLQ96LU7 910 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TMEM74Q96NL1 305 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 TMEM165Q9HC07 324 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 ZNHIT2Q9UHR6 403 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 NYNRINQ9P2P1 1898 aaKnown RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 CXCL11O14625 94 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 KPNA6O60684 536 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 CASP2P42575 452 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 INPP5AQ14642 412 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 ARTNQ5T4W7 220 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 C14orf80Q86SX3 495 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 CROCCP3Q8IVE0 287 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 SLC22A9Q8IVM8 553 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 CLYBLQ8N0X4 340 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TBC1D15Q8TC07 691 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TRPC4APQ8TEL6 797 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 CENPNQ96H22 339 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 FCRL2Q96LA5 508 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 SEPHS2Q99611 448 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 TUBA8Q9NY65 449 aaPredicted RBP17.99■□□□□ 0.47
GNE-201ENST00000377902 NDUFAF1Q9Y375 327 aa17.99■□□□□ 0.47
GNE-201ENST00000377902 J3QRK9 145 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ZNF189O75820 626 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 HGFP14210 728 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ZNF182P17025 639 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 HERVK_113P63132 956 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ZIK1Q3SY52 487 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 CYBRD1Q53TN4 286 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 PRAMEF19Q5SWL8 479 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 PHYKPLQ8IUZ5 450 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 MIER2Q8N344 545 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ADAMTS16Q8TE57 1224 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 LPPQ93052 612 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 FBXL8Q96CD0 374 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 PPP1R10Q96QC0 940 aaKnown RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 ERVK-6Q9BXR3 956 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 AQP12BA6NM10 295 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 DYNC1LI2O43237 492 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 RASAL1O95294 804 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 GFAPP14136 432 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ELK4P28324 431 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 CD86P42081 329 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 CLCN5P51795 746 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 OR4D1Q15615 310 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 SCIMPQ6UWF3 145 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 AQP12AQ8IXF9 295 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 TNIP2Q8NFZ5 429 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 C9orf16Q9BUW7 83 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 MRM3Q9HC36 420 aaKnown RBP17.98■□□□□ 0.47
GNE-201ENST00000377902 NT5MQ9NPB1 228 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 MIOSQ9NXC5 875 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 ACTR3BQ9P1U1 418 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 TIMM22Q9Y584 194 aa17.98■□□□□ 0.47
GNE-201ENST00000377902 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 CASTOR2A6NHX0 329 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 S1PR4O95977 384 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 MATN1P21941 496 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 UGT1A1P22309 533 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 UGT1A4P22310 534 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 UGT1A3P35503 534 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 UGT1A5P35504 534 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 GALNT1Q10472 559 aaPredicted RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 LCN8Q6JVE9 175 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 NANOGP8Q6NSW7 305 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 MINDY1Q8N5J2 469 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 PTCD2Q8WV60 388 aaKnown RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 L3HYPDHQ96EM0 354 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 FEM1CQ96JP0 617 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 TMEM209Q96SK2 561 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 HOPXQ9BPY8 73 aaPredicted RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 TMLHEQ9NVH6 421 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 POLG2Q9UHN1 485 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 TRIM64A6NGJ6 449 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 J3KR12 359 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 BAIAP3O94812 1187 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 DSC2Q02487 901 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms