RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 HACD1B0YJ81 288 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 KPNA6O60684 536 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 DEAF1O75398 565 aaPredicted RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 NFICP08651 508 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 VDRP11473 427 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 FCGR1AP12314 374 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 CLK3P49761 638 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 GSK3BP49841 420 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 SEPHS1P49903 392 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 ARSFP54793 590 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 POU5F1BQ06416 359 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 RBM48Q5RL73 367 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 BTBD8Q5XKL5 378 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 RBM23Q86U06 439 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 LRRC49Q8IUZ0 686 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 DENND6AQ8IWF6 608 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 GOLM1Q8NBJ4 401 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 PAPD5Q8NDF8 572 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 PIK3C3Q8NEB9 887 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 HEXDCQ8WVB3 486 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 VPS33AQ96AX1 596 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 UBXN10Q96LJ8 280 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 RHOJQ9H4E5 214 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 MAGEE1Q9HCI5 957 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 BFARQ9NZS9 450 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 SIP14410 1827 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 DOCK5Q9H7D0 1870 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 SCO2O43819 266 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 NDUFS2O75306 463 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 PIGAP37287 484 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 SLC6A3Q01959 620 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 FRG1Q14331 258 aaKnown RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 C6orf141Q5SZD1 244 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 TTC23LQ6PF05 361 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 SLC26A9Q7LBE3 791 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 VSIG10LQ86VR7 867 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 MINDY1Q8N5J2 469 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 UPF1Q92900 1129 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■■■□ 25.3
CSNK1A1-202ENST00000377843 SDCCAG3Q96C92 435 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ELMO2Q96JJ3 720 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 CDK5RAP1Q96SZ6 601 aaKnown RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 CHID1Q9BWS9 393 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 CASS4Q9NQ75 786 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 EXD2Q9NVH0 621 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ANAPC2Q9UJX6 822 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 PCDHA9Q9Y5H5 950 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 KMOO15229 486 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ALPLP05186 524 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 NDST1P52848 882 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 GOLGA7BQ2TAP0 167 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 DCP2Q8IU60 420 aaKnown RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ANKK1Q8NFD2 765 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 OR13J1Q8NGT2 312 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 DYNC2LI1Q8TCX1 351 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF668Q96K58 619 aaPredicted RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 GMLQ99445 158 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 HOPXQ9BPY8 73 aaPredicted RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 C11orf84Q9BUA3 381 aaPredicted RBP15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 TOR3AQ9H497 397 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 SP140LQ9H930 580 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 HPS4Q9NQG7 708 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 GTF2IRD1Q9UHL9 959 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 PDE10AQ9Y233 779 aa15.66■□□□□ 0.1
CSNK1A1-202ENST00000377843 LOC105371267A0A1B0GV96 52 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 MAGEB16A2A368 324 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 PTGES3LE9PB15 166 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 M0R3G1 203 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 AP2A1O95782 977 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 ITGB3P05106 788 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 NR3C2P08235 984 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 CXCL8P10145 99 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 POLR2EP19388 210 aaKnown RBP15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 CES1P23141 567 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 NCS1P62166 190 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 CCNA1P78396 465 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 CTBP1Q13363 440 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 SNX17Q15036 470 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 SURF1Q15526 300 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 PSMD5Q16401 504 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 DESI1Q6ICB0 168 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 STRADAQ7RTN6 431 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 SAMD7Q7Z3H4 446 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 ADCK1Q86TW2 530 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 IQCF2Q8IXL9 164 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 PEX5LQ8IYB4 626 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 TBC1D21Q8IYX1 336 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF280CQ8ND82 737 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 DNAJB14Q8TBM8 379 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 HDAC2Q92769 488 aaKnown RBP15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 GLMNQ92990 594 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 TMEM125Q96AQ2 219 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 LRRC58Q96CX6 371 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 YME1L1Q96TA2 773 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 MLPHQ9BV36 600 aaPredicted RBP15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 MRIQ9BWK5 157 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 SMOC2Q9H3U7 446 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 ITM2CQ9NQX7 267 aa15.65■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF70Q9UC06 446 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms