RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 APLP1P51693 650 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 CRHR2Q13324 411 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 FRG1Q14331 258 aaKnown RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 OR4D1Q15615 310 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 UNC50Q53HI1 259 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 ARMC3Q5W041 872 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 KDELC1Q6UW63 502 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 GLT6D1Q7Z4J2 308 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 DENND1CQ8IV53 801 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 APLFQ8IW19 511 aaPredicted RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 IMP4Q96G21 291 aaKnown RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 GPR21Q99679 349 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 CINPQ9BW66 212 aaPredicted RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 FAM8A1Q9UBU6 413 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 NDUFAF1Q9Y375 327 aa12.92□□□□□ -0.34
USP11-204ENST00000377107 HEMK1Q9Y5R4 338 aaPredicted RBP12.92□□□□□ -0.34
USP11-204ENST00000377107 A0A1B0GTL3 188 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 PCNAP12004 261 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 PRDX3P30048 256 aaKnown RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 MYBPC1Q00872 1141 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 PFKPQ01813 784 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 SEMA3AQ14563 771 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 CYP51A1Q16850 503 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TIGD2Q4W5G0 525 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 RABL3Q5HYI8 236 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 CLYBLQ8N0X4 340 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 PGBD5Q8N414 524 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ADCY4Q8NFM4 1077 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TRIB2Q92519 343 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 FAR2Q96K12 515 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 BTBD9Q96Q07 612 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 DNAJC15Q9Y5T4 150 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 F5H5T6 163 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 RHOQP17081 205 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 IMPDH1P20839 514 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 EEF1B2P24534 225 aaKnown RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 RANBP1P43487 201 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 RAB27AP51159 221 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 CBLBQ13191 982 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 SAMD4BQ5PRF9 694 aaKnown RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 C6orf10Q5SRN2 563 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 SERINC5Q86VE9 423 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 RALGPS2Q86X27 583 aaPredicted RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 MIER2Q8N344 545 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 VPS50Q96JG6 964 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TMEM74Q96NL1 305 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ABCG8Q9H221 673 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 GSTO2Q9H4Y5 243 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 GKN1Q9NS71 199 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ZMYM5Q9UJ78 669 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 C7orf72A4D263 438 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 OR1I1O60431 355 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 CDK14O94921 469 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ALDOCP09972 364 aaKnown RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 GGT5P36269 586 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 BBS5Q8N3I7 341 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TSPAN14Q8NG11 270 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 ASB9Q96DX5 294 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 APOL5Q9BWW9 433 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 FBXO44Q9H4M3 255 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
USP11-204ENST00000377107 ABT1Q9ULW3 272 aaKnown RBP12.91□□□□□ -0.34
USP11-204ENST00000377107 MOXD2PA6NHM9 499 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 NIPSNAP2O75323 286 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 LAMB3Q13751 1172 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 NFE2Q16621 373 aaPredicted RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 ZIK1Q3SY52 487 aaPredicted RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 RETREG3Q86VR2 466 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 DLG3Q92796 817 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 SUN2Q9UH99 717 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 CNOT6Q9ULM6 557 aaKnown RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 CLGNO14967 610 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 TFAP2AP05549 437 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 CTPS1P17812 591 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 IL10P22301 178 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 YBX1P67809 324 aaKnown RBP12.9□□□□□ -0.34
USP11-204ENST00000377107 TMED1Q13445 227 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
USP11-204ENST00000377107 FAM45BPQ6NSW5 357 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms