RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SENP7Q9BQF6 1050 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CADM1Q9BY67 442 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 STARD13Q9Y3M8 1113 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MTF2Q9Y483 593 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MDC1Q14676 2089 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ESYT3A0FGR9 886 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SEC14L6B5MCN3 397 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RNASEK-C17orf49H0YIS7 233 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 EIF1AYO14602 144 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 HAT1O14929 419 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CABYRO75952 493 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MMP10P09238 476 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CYP11B2P19099 503 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 FCER1GP30273 86 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RFC2P35250 354 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 LEPRP48357 1165 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 IDH2P48735 452 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MAZP56270 477 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SLC39A12Q504Y0 691 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DCST2Q5T1A1 773 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ATXN7L2Q5T6C5 722 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PRAMEF17Q5VTA0 474 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 C1GALT1C1Q96EU7 318 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RNF208Q9H0X6 261 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CPVLQ9H3G5 476 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MYNNQ9NPC7 610 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 OSER1Q9NX31 292 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MEMO1Q9Y316 297 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DNMT3AQ9Y6K1 912 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ERBB4Q15303 1308 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SLC26A4O43511 780 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ADAP00813 363 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ALDH2P05091 517 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 WEE2P0C1S8 567 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 OR56A5P0C7T3 313 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RAB3BP20337 219 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 AGXTP21549 392 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ANTXR2P58335 489 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TAS2R39P59534 338 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ORC1Q13415 861 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ZBED5Q49AG3 693 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CBWD6Q4V339 395 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 KIAA0319Q5VV43 1072 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DENND1BQ6P3S1 775 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 HAGHLQ6PII5 290 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DCDC5Q6ZRR9 648 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TMEM179Q6ZVK1 233 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TEX47Q8TBZ9 253 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CHCHD6Q9BRQ6 235 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TDRD1Q9BXT4 1180 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 GSTO2Q9H4Y5 243 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SNTG1Q9NSN8 517 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ARL8BQ9NVJ2 186 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CCDC59Q9P031 241 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 NDUFAF4Q9P032 175 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MYEF2Q9P2K5 600 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 GNPTGQ9UJJ9 305 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RIMS2Q9UQ26 1411 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 FOXP2O15409 715 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CYB5BO43169 146 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CIAO1O76071 339 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PRKCBP05771 671 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CYP2A6P11509 494 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 NPR3P17342 541 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ATP5JP18859 108 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CDK2P24941 298 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PTGER2P43116 358 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CLCN7P51798 805 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RCAN1P53805 252 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SLC12A3P55017 1021 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 GSTM4Q03013 218 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DUSP4Q13115 394 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MAPK7Q13164 816 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TBX2Q13207 712 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF211Q13398 564 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SNAPC2Q13487 334 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SLC9B1Q4ZJI4 515 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ASPRV1Q53RT3 343 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 FAM122CQ6P4D5 195 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 GALNT5Q7Z7M9 940 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 NLGN1Q8N2Q7 840 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TMEM132CQ8N3T6 1108 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PEX13Q92968 403 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PGLYRP2Q96PD5 576 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PELOQ9BRX2 385 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 B3GAT2Q9NPZ5 323 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RABGEF1Q9UJ41 708 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 CORO2BQ9UQ03 480 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MRPS33Q9Y291 106 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MROH5Q6ZUA9 1318 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ABCC1P33527 1531 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 C2orf78A6NCI8 922 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PDHXO00330 501 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF185O15231 689 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MID1O15344 667 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 RPS6KA4O75676 772 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PIGNO95427 931 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ALOX5P09917 674 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 FGFR4P22455 802 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms