RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 IGSF9Q9P2J2 1179 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MAPRE3Q9UPY8 281 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 NR2E3Q9Y5X4 410 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SPACA6W5XKT8 324 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PDE9AO76083 593 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CLTBP09497 229 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PKMP14618 531 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 AP5B1Q2VPB7 878 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 HECTD3Q5T447 861 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 USP45Q70EL2 814 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 HDDC2Q7Z4H3 204 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 FGD2Q7Z6J4 655 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 RALGPS2Q86X27 583 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 DENND6AQ8IWF6 608 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PHACTR4Q8IZ21 702 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 COQ10BQ9H8M1 238 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CRNNQ9UBG3 495 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CNTNAP1P78357 1384 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CCNCP24863 283 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MC4RP32245 332 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CDK9P50750 372 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 POLR2JP52435 117 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MRPS6P82932 125 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PRKCQQ04759 706 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 GAD2Q05329 585 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 ACAP2Q15057 778 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 TMEM198Q66K66 360 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CRTC3Q6UUV7 619 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 EIF3MQ7L2H7 374 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 SPRTNQ9H040 489 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MUC13Q9H3R2 512 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 ALG2Q9H553 416 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 AGO1Q9UL18 857 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 GSTK1Q9Y2Q3 226 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 TREML2Q5T2D2 321 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 SLCO6A1Q86UG4 719 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 OR4K2Q8NGD2 314 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PPTC7Q8NI37 304 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 HEXDCQ8WVB3 486 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 SLC9A7Q96T83 725 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 TEX264Q9Y6I9 313 aa11.53□□□□□ -0.56
PTCH1-203ENST00000375274 PRMT5O14744 637 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-203ENST00000375274 TLR5O60602 858 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 CYP4B1P13584 511 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 SLC18A2Q05940 514 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 TAB1Q15750 504 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 SLC9B1Q4ZJI4 515 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 DCBLD1Q8N8Z6 715 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 MCFD2Q8NI22 146 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 PHF10Q8WUB8 498 aaKnown RBP11.52□□□□□ -0.56
PTCH1-203ENST00000375274 TSSK3Q96PN8 268 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 PCDH12Q9NPG4 1184 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF536O15090 1300 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 MYH8P13535 1937 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ITM2AO43736 263 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 NPHS1O60500 1241 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 TSPAN1O60635 241 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 MSCO60682 206 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 LRATO95237 230 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 H6PDO95479 791 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 PIGRP01833 764 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 THRBP10828 461 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 UMPSP11172 480 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 PAX3P23760 479 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 CYP4F2P78329 520 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 CYP4F3Q08477 520 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 LCP2Q13094 533 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF460Q14592 562 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 CDK20Q8IZL9 346 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 C10orf53Q8N6V4 93 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ATL1Q8WXF7 558 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 SLC47A1Q96FL8 570 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ITCHQ96J02 903 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 ZFP42Q96MM3 310 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.56
PTCH1-203ENST00000375274 FZD8Q9H461 694 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 DPEP3Q9H4B8 488 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 SPATA2Q9UM82 520 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 SH3GLB1Q9Y371 365 aa11.52□□□□□ -0.56
PTCH1-203ENST00000375274 RPP40O75818 363 aaKnown RBP11.52□□□□□ -0.57
PTCH1-203ENST00000375274 GRK4P32298 578 aa11.52□□□□□ -0.57
PTCH1-203ENST00000375274 MTHFRP42898 656 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms