RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 BBS2Q9BXC9 721 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ZNHIT2Q9UHR6 403 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 H3BMM5 538 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PLK4O00444 970 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PRDX3P30048 256 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 NDST2P52849 883 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ARF5P84085 180 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 BOP1Q14137 746 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 Q6ZVU0 165 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PIWIL4Q7Z3Z4 852 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ULK2Q8IYT8 1036 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 SCG3Q8WXD2 468 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ASB8Q9H765 288 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 SSU72Q9NP77 194 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 A0A1B0GVM2 712 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 TCAF2A6NFQ2 919 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 A8MT66 165 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 GIPC1O14908 333 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 SBK3P0C264 359 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ATXN1LP0C7T5 689 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 UBTFL6P0CB48 400 aaPredicted RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PTDSS1P48651 473 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ZRSR2Q15696 482 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PARP15Q460N3 678 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 ASRGL1Q7L266 308 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 FIBCD1Q8N539 461 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 GCNAQ96QF7 691 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 C17orf80Q9BSJ5 609 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 SLC7A8Q9UHI5 535 aa11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 LSM7Q9UK45 103 aaKnown RBP11.93□□□□□ -0.5
TMEM38B-202ENST00000374692 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 SNX2O60749 519 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 LTA4HP09960 611 aaKnown RBP11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 EN2P19622 333 aaPredicted RBP11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 GRK2P25098 689 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 AKT1P31749 480 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 ADRA1AP35348 466 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 HSPA14Q0VDF9 509 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 TEAD2Q15562 447 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 GRASPQ7Z6J2 395 aaPredicted RBP11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 CUZD1Q86UP6 607 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 CDYL2Q8N8U2 506 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 CRLS1Q9UJA2 301 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 PKP3Q9Y446 797 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 UPK3BL1B0FP48 263 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 UPK3BL2E5RIL1 263 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 MRPS22P82650 360 aaKnown RBP11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 MILR1Q7Z6M3 343 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 GALNT4Q8N4A0 578 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 EEF1AKMT1Q8WVE0 214 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 TOP1MTQ969P6 601 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 LINGO1Q96FE5 620 aa11.92□□□□□ -0.5
TMEM38B-202ENST00000374692 NR5A2O00482 541 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PSMD3O43242 534 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CLDN11O75508 207 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 BAIAP3O94812 1187 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 KLHL2O95198 593 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 NDST3O95803 873 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 S1PR4O95977 384 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 MT-ND1P03886 318 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CCR2P41597 374 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 MAGEA11P43364 429 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PSEN1P49768 467 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CYTH1Q15438 398 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 OR4D1Q15615 310 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 ZNF549Q6P9A3 640 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PYCR2Q96C36 320 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 FEM1AQ9BSK4 669 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 SEMA6AQ9H2E6 1030 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 TRPM7Q96QT4 1865 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PDCD11Q14690 1871 aaKnown RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 SNNO75324 88 aaPredicted RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 EPCAMP16422 314 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PSMC3P17980 439 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PFKPQ01813 784 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 KLF10Q13118 480 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 DDX39BQ13838 428 aaKnown RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 FAM109BQ6ICB4 259 aaPredicted RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PAOXQ6QHF9 649 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CALML6Q8TD86 181 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 TRMT6Q9UJA5 497 aaKnown RBP11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 INPP4BO15327 924 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 BIRC5O15392 142 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 DNAJA2O60884 412 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 TBX10O75333 385 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 PRAMEF1O95521 474 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 COX4I1P13073 169 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 CDH4P55283 916 aa11.91□□□□□ -0.5
TMEM38B-202ENST00000374692 KIAA0930Q6ICG6 404 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms