RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TAC4Q86UU9 113 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 KBTBD2Q8IY47 623 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 FAM220BPB1ANY3 271 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 IGSF6O95976 241 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 TOP3BO95985 862 aaKnown RBP17.41■□□□□ 0.38
PTPRU-202ENST00000373779 TYMPP19971 482 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 SLC1A2P43004 574 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 LILRA4P59901 499 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 ACSM2AQ08AH3 577 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 ACSM2BQ68CK6 577 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 ALG2Q9H553 416 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 CDV3Q9UKY7 258 aaKnown RBP17.41■□□□□ 0.38
PTPRU-202ENST00000373779 KIF13AQ9H1H9 1805 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 CDH3P22223 829 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 GPC1P35052 558 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 SLC25A51Q9H1U9 297 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 PADI4Q9UM07 663 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 SATB2Q9UPW6 733 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
PTPRU-202ENST00000373779 HPCAL1P37235 193 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ANXA11P50995 505 aaKnown RBP17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ALDH6A1Q02252 535 aaKnown RBP17.4■□□□□ 0.38
PTPRU-202ENST00000373779 TSTD2Q5T7W7 516 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 MON1AQ86VX9 555 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 LEMD2Q8NC56 503 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 LINGO3P0C6S8 592 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 UMPSP11172 480 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 MC4RP32245 332 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 EPHB3P54753 998 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 TRAP1Q12931 704 aaKnown RBP17.4■□□□□ 0.38
PTPRU-202ENST00000373779 SFT2D3Q587I9 215 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 C15orf39Q6ZRI6 1047 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 MOB2Q70IA6 237 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ADI1Q9BV57 179 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 CCDC106Q9BWC9 280 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 C9JVG2 144 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 NADK2Q4G0N4 442 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ARMC3Q5W041 872 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 CAND1Q86VP6 1230 aaKnown RBP17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ASB9Q96DX5 294 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 PCDHAC1Q9H158 963 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 PLK2Q9NYY3 685 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 CCNFP41002 786 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 TP53BP2Q13625 1128 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM159Q96B96 161 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 PCED1BQ96HM7 432 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ADGRE2Q9UHX3 823 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 DNMT3LQ9UJW3 386 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
PTPRU-202ENST00000373779 A8MX80 341 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 ZBTB14O43829 449 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 SREBF2Q12772 1141 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 POP5Q969H6 163 aaKnown RBP17.39■□□□□ 0.38
PTPRU-202ENST00000373779 PPM1MQ96MI6 270 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 CXorf21Q9HAI6 301 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 SNX8Q9Y5X2 465 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.38
PTPRU-202ENST00000373779 LOC100506127A0A0U1RQW1 187 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 GNAZP19086 355 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 MTHFRP42898 656 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 CLCQ05315 142 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 LCP2Q13094 533 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 STARD3Q14849 445 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 THAP5Q7Z6K1 395 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 DNAJC1Q96KC8 554 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 OR52E6Q96RD3 313 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 KLHL20Q9Y2M5 609 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 YJEFN3A6XGL0 299 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 SLC7A1P30825 629 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 DSC2Q02487 901 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 GRIK3Q13003 919 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 TSNQ15631 228 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 INAQ16352 499 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 PITRM1Q5JRX3 1037 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 KIAA0930Q6ICG6 404 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 RALGPS2Q86X27 583 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 REXO5Q96IC2 774 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 COPG1Q9Y678 874 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 F7P08709 466 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 GPR15P49685 360 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 CASP12Q6UXS9 341 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 TBATAQ96M53 351 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 CNOT6Q9ULM6 557 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 PIP5K1BO14986 540 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 IL23RQ5VWK5 629 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 CXCL17Q6UXB2 119 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 WDR12Q9GZL7 423 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 ITGB1BP2Q9UKP3 347 aa17.39■□□□□ 0.37
PTPRU-202ENST00000373779 AGO1Q9UL18 857 aaKnown RBP17.39■□□□□ 0.37
PTPRU-202ENST00000373779 MYH7BA7E2Y1 1941 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms