RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 DBX2Q6ZNG2 339 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 RAVER1Q8IY67 606 aaKnown RBP18.34■□□□□ 0.53
PBX3-205ENST00000373492 TAB3Q8N5C8 712 aaPredicted RBP18.34■□□□□ 0.53
PBX3-205ENST00000373492 PDCD7Q8N8D1 485 aaKnown RBP18.34■□□□□ 0.53
PBX3-205ENST00000373492 CENPTQ96BT3 561 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 NUS1Q96E22 293 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 KLHDC7BQ96G42 594 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 COQ10AQ96MF6 247 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 SMIM14Q96QK8 99 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 ELF4Q99607 663 aaPredicted RBP18.34■□□□□ 0.53
PBX3-205ENST00000373492 ETNK1Q9HBU6 452 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 RAB6BQ9NRW1 208 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 HACD3Q9P035 362 aa18.34■□□□□ 0.53
PBX3-205ENST00000373492 SPTBN2O15020 2390 aa18.33■□□□□ 0.53
PBX3-205ENST00000373492 H0Y8X5 98 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 CCDC188H7C350 402 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 YKT6O15498 198 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 PCDHGA12O60330 932 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 CLDN7O95471 211 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 AP2A1O95782 977 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 KRT14P02533 472 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ATXN1LP0C7T5 689 aaKnown RBP18.33■□□□□ 0.52
PBX3-205ENST00000373492 PIRTP0C851 137 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ZSCAN5DPP0CG00 497 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 CHRNA4P43681 627 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 CCT8P50990 548 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 BASP1P80723 227 aaKnown RBP18.33■□□□□ 0.52
PBX3-205ENST00000373492 KCTD11Q693B1 232 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 PSAPL1Q6NUJ1 521 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 RANBP10Q6VN20 620 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ABI3BPQ7Z7G0 1075 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 PRUNE1Q86TP1 453 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 LINC00523Q86TU6 105 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 OXR1Q8N573 874 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 GLIS1Q8NBF1 620 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 TP53I13Q8NBR0 393 aaPredicted RBP18.33■□□□□ 0.52
PBX3-205ENST00000373492 DEFB124Q8NES8 71 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ZNF592Q92610 1267 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 RUNDC3BQ96NL0 473 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 KLF6Q99612 283 aaPredicted RBP18.33■□□□□ 0.52
PBX3-205ENST00000373492 GPR63Q9BZJ6 419 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 TRABDQ9H4I3 376 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ZFYVE1Q9HBF4 777 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 PKD2L2Q9NZM6 624 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 CA5BQ9Y2D0 317 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 ZNF711Q9Y462 761 aa18.33■□□□□ 0.52
PBX3-205ENST00000373492 A0A1B0GTQ1 180 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 TOR1BO14657 336 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 RAD51BO15315 384 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 ECEL1O95672 775 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 ADRA1AP35348 466 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 ARRB1P49407 418 aaPredicted RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 CLDN2P57739 230 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 PTSQ03393 145 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 SEMA5AQ13591 1074 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 SPARCL1Q14515 664 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 IRF4Q15306 451 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 KYAT3Q6YP21 454 aaKnown RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 GCNT7Q6ZNI0 430 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 LYSMD3Q7Z3D4 306 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 HSD11B1LQ7Z5J1 315 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 PTAR1Q7Z6K3 402 aaPredicted RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 DCP2Q8IU60 420 aaKnown RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 CBARPQ8N350 705 aaPredicted RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 BLOC1S5Q8TDH9 187 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 DTD2Q96FN9 168 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 APOL2Q9BQE5 337 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 DDX47Q9H0S4 455 aaKnown RBP18.32■□□□□ 0.52
PBX3-205ENST00000373492 SHOC2Q9UQ13 582 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 CABIN1Q9Y6J0 2220 aa18.32■□□□□ 0.52
PBX3-205ENST00000373492 A0A0U1RQS6 177 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 POM121BA6NF01 834 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 GOLGA8CPA6NN73 597 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 FLRT2O43155 660 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 SH3BP5O60239 455 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 PCCBP05166 539 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 C1SP09871 688 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 THEGLP0DJG4 465 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 IGFALSP35858 605 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 ETV3P41162 512 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 RABIFP47224 123 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 RXRGP48443 463 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 STC1P52823 247 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 MTM1Q13496 603 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 PPP1R7Q15435 360 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 TRIP13Q15645 432 aaPredicted RBP18.31■□□□□ 0.52
PBX3-205ENST00000373492 WSCD2Q2TBF2 565 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 Q6ZVL8 140 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 GLT6D1Q7Z4J2 308 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 SPATS2Q86XZ4 545 aaKnown RBP18.31■□□□□ 0.52
PBX3-205ENST00000373492 NAXDQ8IW45 347 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 NRSN1Q8IZ57 195 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 BMFQ96LC9 184 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 ARNT2Q9HBZ2 717 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 MBNL1Q9NR56 388 aaKnown RBP18.31■□□□□ 0.52
PBX3-205ENST00000373492 RAD18Q9NS91 495 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 PCYOX1Q9UHG3 505 aa18.31■□□□□ 0.52
PBX3-205ENST00000373492 MED19A0JLT2 244 aaPredicted RBP18.3■□□□□ 0.52
PBX3-205ENST00000373492 PCNX2A6NKB5 2137 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms