RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 RFXANKO14593 260 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 SLC7A1P30825 629 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 PGDP52209 483 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 TNK2Q07912 1038 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 BPIFB6Q8NFQ5 453 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 GDPD5Q8WTR4 605 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 CCDC115Q96NT0 180 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 AIFM2Q9BRQ8 373 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 TMEM5Q9Y2B1 443 aa14.38□□□□□ -0.11
UBR2-201ENST00000372899 LGALS2P05162 132 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 RPL38P63173 70 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 ABCA11PQ4W5N1 156 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 PIK3C3Q8NEB9 887 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 KLHL32Q96NJ5 620 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 DPYSL5Q9BPU6 564 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBR2-201ENST00000372899 ACKR2O00590 384 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SMAD3P84022 425 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 CDKL1Q00532 357 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 GIT2Q14161 759 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 RFTN2Q52LD8 501 aaPredicted RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 GPRIN3Q6ZVF9 776 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 UBE2R2Q712K3 238 aaPredicted RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 ZNF611Q8N823 705 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CFAP97Q9P2B7 532 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 RIIAD1A6NNX1 92 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CHST10O43529 356 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 IZUMO2Q6UXV1 221 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ZNF720Q7Z2F6 126 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SYVN1Q86TM6 617 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 ARHGEF33A8MVX0 844 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 GJA8P48165 433 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 TLR1Q15399 786 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 QSOX2Q6ZRP7 698 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ADGRG6Q86SQ4 1221 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SERINC1Q9NRX5 453 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 F8VZ95 297 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 PER2O15055 1255 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ECHS1P30084 290 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 VLDLRP98155 873 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ILF3Q12906 894 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBR2-201ENST00000372899 CHAF1BQ13112 559 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SLC9B1Q4ZJI4 515 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 HID1Q8IV36 788 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 WNT8BQ93098 351 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 SEC14L3Q9UDX4 400 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SPATA31A5Q5VU36 1347 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SPATA31A7Q8IWB4 1347 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 HMGCRP04035 888 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 RGMBQ6NW40 437 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 ARMC10Q8N2F6 343 aa14.37□□□□□ -0.11
UBR2-201ENST00000372899 CDC42EP4Q9H3Q1 356 aaKnown RBP14.37□□□□□ -0.11
UBR2-201ENST00000372899 A0A075B6Q4 140 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 TPP1O14773 563 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 SLC35G6P0C7Q6 338 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 LAMP2P13473 410 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 DGKEP52429 567 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 TRIM28Q13263 835 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 LRRC34Q8IZ02 419 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 UNC5BQ8IZJ1 945 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 ACTL9Q8TC94 416 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 KIAA1143Q96AT1 154 aaPredicted RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 WRAP53Q9BUR4 548 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 PNO1Q9NRX1 252 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 POLLQ9UGP5 575 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 PCDHGC3Q9UN70 934 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 ARL5CA6NH57 179 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 RGS10O43665 173 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 CHST9Q7L1S5 443 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 SRFBP1Q8NEF9 429 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 SLC47A1Q96FL8 570 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 MAFFQ9ULX9 164 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 ASTN2O75129 1339 aaPredicted RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 PRH1P02810 166 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 ZNF433Q8N7K0 673 aaPredicted RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 CASKIN2Q8WXE0 1202 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 SEMA6AQ9H2E6 1030 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 FBXO6Q9NRD1 293 aaPredicted RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 RNF17Q9BXT8 1623 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 HSD3B1P14060 373 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 ERCC2P18074 760 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 PSMB4P28070 264 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 NEPROQ6NW34 567 aa14.36□□□□□ -0.11
UBR2-201ENST00000372899 KYAT3Q6YP21 454 aaKnown RBP14.36□□□□□ -0.11
UBR2-201ENST00000372899 PHC3Q8NDX5 983 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms