RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CHST4Q8NCG5 386 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 OR2T12Q8NG77 320 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CREB3L1Q96BA8 519 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 TARS2Q9BW92 718 aaKnown RBP15.26■□□□□ 0.03
COL5A1-201ENST00000371817 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF99A8MXY4 864 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-201ENST00000371817 MCIDASD6RGH6 385 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 SH3BGRLO75368 114 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 DGKAP23743 735 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 YAP1P46937 504 aaKnown RBP15.26■□□□□ 0.03
COL5A1-201ENST00000371817 USP30Q70CQ3 517 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 RASGEF1AQ8N9B8 481 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 OR2L2Q8NH16 312 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 PPP1R13LQ8WUF5 828 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 ASB15Q8WXK1 588 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 RNF31Q96EP0 1072 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 SEMA6BQ9H3T3 888 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 KBTBD4Q9NVX7 518 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 SPAG17Q6Q759 2223 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 RAB10P61026 200 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF730Q6ZMV8 503 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 ZDHHC17Q8IUH5 632 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 KAT2AQ92830 837 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 TBC1D14Q9P2M4 693 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CLUP10909 449 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CRY1Q16526 586 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 COLEC12Q5KU26 742 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 VANGL1Q8TAA9 524 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-201ENST00000371817 ZFP3Q96NJ6 502 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CEP41Q9BYV8 373 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 TTC3P53804 2025 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 C2orf74A8MZ97 194 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 TMEM53Q6P2H8 277 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 GJD3Q8N144 294 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CDC42BPGQ6DT37 1551 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 M0R233 179 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TSPAN5P62079 268 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 MTA1Q13330 715 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 SLC37A3Q8NCC5 494 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CCDC54Q8NEL0 328 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 SMARCD1Q96GM5 515 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CDK5RAP1Q96SZ6 601 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ATP10BO94823 1461 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 FBP2O00757 339 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 FXYD6-FXYD2A0A087WZ82 144 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 DISC1C4P0D8 188 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TCF7P36402 384 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 GPD2P43304 727 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 RPL38P63173 70 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF829Q3KNS6 432 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ZBED5Q49AG3 693 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 MAP3K14Q99558 947 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TSNAXQ99598 290 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 FXYD6Q9H0Q3 95 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 A0A1B0GVC2 190 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ARCN1P48444 511 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TIGD6Q17RP2 521 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 IDNKQ5T6J7 187 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 RIOX2Q8IUF8 465 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 COL26A1Q96A83 441 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 LMAN2LQ9H0V9 348 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 VPS28Q9UK41 221 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 GLRA2P23416 452 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 PDIA6Q15084 440 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 RBM48Q5RL73 367 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 RAD51AP1Q96B01 352 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 FKBP7Q9Y680 259 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 DBIP07108 87 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 LINC00032P0C843 101 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 GSTT2P0CG29 244 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CDH1P12830 882 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 KHDC1Q4VXA5 237 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 NXF3Q9H4D5 531 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ELAC1Q9H777 363 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 ABHD14A-ACY1A0A1B0GW23 586 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 PLATP00750 562 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 KCNT2Q6UVM3 1135 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 OR6J1Q8NGC5 347 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CD300LFQ8TDQ1 290 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 TMEM176AQ96HP8 235 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 CBWD1Q9BRT8 395 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 NMUR2Q9GZQ4 415 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-201ENST00000371817 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 MED14O60244 1454 aa15.25■□□□□ 0.03
COL5A1-201ENST00000371817 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
COL5A1-201ENST00000371817 DNASE1L3Q13609 305 aa15.24■□□□□ 0.03
COL5A1-201ENST00000371817 LSM12Q3MHD2 195 aaKnown RBP15.24■□□□□ 0.03
COL5A1-201ENST00000371817 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
COL5A1-201ENST00000371817 GPR180Q86V85 440 aa15.24■□□□□ 0.03
COL5A1-201ENST00000371817 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
COL5A1-201ENST00000371817 ASCC1Q8N9N2 400 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms