RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 COCHO43405 550 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 KIF1CO43896 1103 aaKnown RBP28.9■■■□□ 2.22
SSBP3-204ENST00000371320 MS4A2Q01362 244 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 OR4D1Q15615 310 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 MMEL1Q495T6 779 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 SLC8B1Q6J4K2 584 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 GLT6D1Q7Z4J2 308 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 FAM126BQ8IXS8 530 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 CRIPAKQ8N1N5 446 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 PQLC1Q8N2U9 271 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 HMGCLL1Q8TB92 370 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 CEP295NLQ96MC4 621 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.9■■■□□ 2.22
SSBP3-204ENST00000371320 RHOCP08134 193 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 CDH13P55290 713 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 ZNF177Q13360 481 aaPredicted RBP28.9■■■□□ 2.22
SSBP3-204ENST00000371320 PTK2BQ14289 1009 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 ZFP1Q6P2D0 407 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 OR4K2Q8NGD2 314 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 RHEBL1Q8TAI7 183 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 OVCA2Q8WZ82 227 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 SCUBE2Q9NQ36 999 aa28.9■■■□□ 2.22
SSBP3-204ENST00000371320 ARIH1Q9Y4X5 557 aaPredicted RBP28.9■■■□□ 2.22
SSBP3-204ENST00000371320 ILVBLA1L0T0 632 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 UBXN8O00124 270 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 PEX1O43933 1283 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 AQP4P55087 323 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 MRPS22P82650 360 aaKnown RBP28.89■■■□□ 2.22
SSBP3-204ENST00000371320 OR52E8Q6IFG1 317 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 KLHDC10Q6PID8 442 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 CLYBLQ8N0X4 340 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 BHLHE22Q8NFJ8 381 aaPredicted RBP28.89■■■□□ 2.22
SSBP3-204ENST00000371320 PLD4Q96BZ4 506 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 TFB2MQ9H5Q4 396 aaKnown RBP28.89■■■□□ 2.22
SSBP3-204ENST00000371320 CCDC167Q9P0B6 97 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 MTRRQ9UBK8 725 aa28.89■■■□□ 2.22
SSBP3-204ENST00000371320 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.89■■■□□ 2.21
SSBP3-204ENST00000371320 RHOBTB1O94844 696 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 KLKB1P03952 638 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 LYNP07948 512 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 CORO1AP31146 461 aaKnown RBP28.89■■■□□ 2.21
SSBP3-204ENST00000371320 PSME3P61289 254 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 TAF1AQ15573 450 aaPredicted RBP28.89■■■□□ 2.21
SSBP3-204ENST00000371320 PFKFB4Q16877 469 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 AFTPHQ6ULP2 937 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 C19orf60Q96EN9 201 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 ASB2Q96Q27 587 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 GKN1Q9NS71 199 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 ADA2Q9NZK5 511 aa28.89■■■□□ 2.21
SSBP3-204ENST00000371320 H3BMM5 538 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 BCAS2O75934 225 aaPredicted RBP28.88■■■□□ 2.21
SSBP3-204ENST00000371320 MT-CO1P00395 513 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 FMO4P31512 558 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 ALDH1A3P47895 512 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 SGSHP51688 502 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 GRAMD1BQ3KR37 738 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 FAM219BQ5XKK7 198 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 CYHR1Q6ZMK1 362 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 LRRC43Q8N309 656 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 CCDC68Q9H2F9 335 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 SYTL2Q9HCH5 934 aa28.88■■■□□ 2.21
SSBP3-204ENST00000371320 AGO1Q9UL18 857 aaKnown RBP28.88■■■□□ 2.21
SSBP3-204ENST00000371320 ATP6AP2A0A1C7CYW4 349 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 C2orf81A6NN90 581 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 CBX4O00257 560 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 ATP6AP2O75787 350 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 STC2O76061 302 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 SIX3O95343 332 aaPredicted RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 CR2P20023 1033 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 SH3BP2P78314 561 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 USP41Q3LFD5 358 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 OGFRL1Q5TC84 451 aaPredicted RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 LARP4Q71RC2 724 aaKnown RBP eCLIP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 PCDH20Q8N6Y1 951 aaKnown RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 MDGA1Q8NFP4 955 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 TDRD1Q9BXT4 1180 aaKnown RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 TAS2R13Q9NYV9 303 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 PCDHGA7Q9Y5G6 932 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 TRIM38O00635 465 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 NDUFS3O75489 264 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 SNRPB2P08579 225 aaKnown RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 UQCRBP14927 111 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 ALDH7A1P49419 539 aaKnown RBP28.87■■■□□ 2.21
SSBP3-204ENST00000371320 CYTH1Q15438 398 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 UGT3A2Q3SY77 523 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 REP15Q6BDI9 236 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 LPGAT1Q92604 370 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 ATOH8Q96SQ7 321 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 CACNA2D2Q9NY47 1150 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 TRPM5Q9NZQ8 1165 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 FAM50BQ9Y247 325 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 CHD5Q8TDI0 1954 aa28.87■■■□□ 2.21
SSBP3-204ENST00000371320 TSPAN3O60637 253 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 SRP72O76094 671 aaKnown RBP28.86■■■□□ 2.21
SSBP3-204ENST00000371320 PRLP01236 227 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 MTHFD2P13995 350 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 GFAPP14136 432 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 TCN1P20061 433 aaPredicted RBP28.86■■■□□ 2.21
SSBP3-204ENST00000371320 CHST9Q7L1S5 443 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 DLG3Q92796 817 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms