RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SCDO00767 359 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 CST8O60676 142 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 OLFM2O95897 454 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 MOCS2O96007 188 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 RHOP08100 348 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PECAM1P16284 738 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 DESP17661 470 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PTPN2P17706 415 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 HDCP19113 662 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 CCR1P32246 355 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 ATP5C1P36542 298 aaKnown RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 GRK6P43250 576 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 KCNJ1P48048 391 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PPP3CCP48454 512 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 TUBP50607 506 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 AGFG1P52594 562 aaKnown RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 MLLT6P55198 1093 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 ERVFRD-1P60508 538 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 DYNLT1P63172 113 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 ITIH3Q06033 890 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 SLC10A2Q12908 348 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 DPYSQ14117 519 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 KRT81Q14533 505 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 TEAD2Q15562 447 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 CYP1B1Q16678 543 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 ERCC6LQ2NKX8 1250 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PABPC1LQ4VXU2 614 aaKnown RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 FBLN7Q53RD9 439 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PITRM1Q5JRX3 1037 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 BRMS1LQ5PSV4 323 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 FAM182AQ5T1J6 154 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 MANEALQ5VSG8 457 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 NADSYN1Q6IA69 706 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 TLDC1Q6P9B6 456 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 KLHDC10Q6PID8 442 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 SYCE2Q6PIF2 218 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 TMC5Q6UXY8 1006 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 BBS12Q6ZW61 710 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 GRASPQ7Z6J2 395 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 RFX6Q8HWS3 928 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 KLHL7Q8IXQ5 586 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 PLD5Q8N7P1 536 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 MAB21L3Q8N8X9 362 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 NETO2Q8NC67 525 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 MNS1Q8NEH6 495 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 ZSWIM3Q96MP5 696 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 CSPG4P5Q96PW8 444 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 HAPLN3Q96S86 360 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 KRT12Q99456 494 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 DCLK3Q9C098 648 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 SIK2Q9H0K1 926 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 DDX47Q9H0S4 455 aaKnown RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 TRPC7Q9HCX4 862 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.63□□□□□ -1.83
MCF2-202ENST00000370573 SMPD4Q9NXE4 827 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 ZDHHC7Q9NXF8 308 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 UXTQ9UBK9 157 aaPredicted RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 FBLN5Q9UBX5 448 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 OR12D3Q9UGF7 316 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 CDH22Q9UJ99 828 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 NEU3Q9UQ49 428 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 HBS1LQ9Y450 684 aaKnown RBP3.63□□□□□ -1.83
MCF2-202ENST00000370573 HS3ST4Q9Y661 456 aa3.63□□□□□ -1.83
MCF2-202ENST00000370573 A0A087WV62 115 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 C7orf72A4D263 438 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 EFCAB8A8MWE9 144 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ZNF487B1APH4 448 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 EEF2KO00418 725 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 DCLK1O15075 740 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CTIFO43310 598 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 STC2O76061 302 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 IRF1P10914 325 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MBL2P11226 248 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 COILP38432 576 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 HCAR3P49019 387 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 AIF1P55008 147 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC7A9P82251 487 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ADAM15Q13444 863 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SNX1Q13596 522 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CCNG2Q16589 344 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MS4A13Q5J8X5 152 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC9A4Q6AI14 798 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C16orf54Q6UWD8 224 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TMEM184AQ6ZMB5 413 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 B4GALNT4Q76KP1 1039 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CXorf67Q86X51 503 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 VSIG1Q86XK7 387 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MAP7D3Q8IWC1 876 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ELMOD1Q8N336 334 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ITFG1Q8TB96 612 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ACTL9Q8TC94 416 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 IGSF8Q969P0 613 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MAGOHBQ96A72 148 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 TBC1D20Q96BZ9 403 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 HAUS1Q96CS2 278 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 P2RY11Q96G91 374 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C1orf74Q96LT6 269 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CDK5RAP1Q96SZ6 601 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 NAP1L3Q99457 506 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms