RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ANKS1BQ7Z6G8 1248 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 NPAS4Q8IUM7 802 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 SLAIN1Q8ND83 568 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 ASZ1Q8WWH4 475 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 KCTD5Q9NXV2 234 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 PRPF19Q9UMS4 504 aaKnown RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 ZFP37Q9Y6Q3 630 aaPredicted RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 CENPXA8MT69 81 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 ACSL4O60488 711 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 C22orf31O95567 290 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 CDH4P55283 916 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 RAB14P61106 215 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 PTSQ03393 145 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 PPIDQ08752 370 aaKnown RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 CACTIN-AS1Q8N1I8 211 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 SYT17Q9BSW7 474 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 PAIP1Q9H074 479 aaKnown RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 SALL4Q9UJQ4 1053 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 AGRPO00253 132 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 GCATO75600 419 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 L1CAMP32004 1257 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 ZNF697Q5TEC3 545 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 AGMOQ6ZNB7 445 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 C3orf18Q9UK00 162 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 GMPPBQ9Y5P6 360 aa19.64■□□□□ 0.74
LMO4-202ENST00000370544 PARP4Q9UKK3 1724 aaKnown RBP19.64■□□□□ 0.73
LMO4-202ENST00000370544 C2CD4BA6NLJ0 364 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 LRIG2O94898 1065 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 CST1P01037 141 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 UGT2B4P06133 528 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ASPAP45381 313 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 DGCR6Q14129 220 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 FAM124AQ86V42 546 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 CPA6Q8N4T0 437 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ZBTB2Q8N680 514 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 BPIFB6Q8NFQ5 453 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.73
LMO4-202ENST00000370544 ERAL1O75616 437 aaKnown RBP19.64■□□□□ 0.73
LMO4-202ENST00000370544 IPO13O94829 963 aaKnown RBP19.64■□□□□ 0.73
LMO4-202ENST00000370544 TGDSO95455 350 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 CACNG1Q06432 222 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ARHGAP36Q6ZRI8 547 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ARMC8Q8IUR7 673 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ZNF567Q8N184 647 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 OR4A15Q8NGL6 344 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 STYXQ8WUJ0 223 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 CLIP3Q96DZ5 547 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 RTKNQ9BST9 563 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 OR10H1Q9Y4A9 318 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 PRR5-ARHGAP8B1AHC4 643 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 SPAM1P38567 509 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 ARHGAP8P85298 464 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 SLC10A6Q3KNW5 377 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 LSM12Q3MHD2 195 aaKnown RBP19.64■□□□□ 0.73
LMO4-202ENST00000370544 CHST9Q7L1S5 443 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 VPS35Q96QK1 796 aa19.64■□□□□ 0.73
LMO4-202ENST00000370544 CHURC1-FNTBB4DL54 471 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 WBP4O75554 376 aaKnown RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 ATP1A4Q13733 1029 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 DLG2Q15700 870 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 TCAIMQ8N3R3 496 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 OR10G6Q8NH81 332 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 SPRTNQ9H040 489 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 TLE6Q9H808 572 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 BBIP1A8MTZ0 92 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 C4BPBP20851 252 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 C16orf72Q14CZ0 275 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 NPY5RQ15761 445 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 PLA2G4EQ3MJ16 856 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 ANKRD22Q5VYY1 191 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 EVA1BQ9NVM1 165 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 TCAF1Q9Y4C2 921 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 MATN3O15232 486 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 SMIM11AP58511 58 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 CAPN13Q6MZZ7 669 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 TRIM40Q6P9F5 258 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 LINGO4Q6UY18 593 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 PROSER1Q86XN7 944 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 PHF10Q8WUB8 498 aaKnown RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 PPCDCQ96CD2 204 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 NPAS2Q99743 824 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 AARSD1Q9BTE6 412 aaKnown RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 DEC1Q9P2X7 70 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 FZD10Q9ULW2 581 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 DHRS12A0PJE2 317 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 OR6B1O95007 311 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 HIST1H2ABP04908 130 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 ITPKAP23677 461 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 LMO2P25791 158 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 ADSSP30520 456 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 NUP62P37198 522 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 GNA12Q03113 381 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 FASTKD3Q14CZ7 662 aaKnown RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 ZNF57Q68EA5 555 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 GET4Q7L5D6 327 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 HIST3H2AQ7L7L0 130 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 SPATA19Q7Z5L4 167 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 HIST1H2ACQ93077 130 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms