RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ETNK1Q9HBU6 452 aa15.04■□□□□ -0
LMO4-201ENST00000370542 KCNK9Q9NPC2 374 aa15.04■□□□□ -0
LMO4-201ENST00000370542 AASDHPPTQ9NRN7 309 aa15.04■□□□□ -0
LMO4-201ENST00000370542 TMPRSS4Q9NRS4 437 aa15.04■□□□□ -0
LMO4-201ENST00000370542 SNX10Q9Y5X0 201 aa15.04■□□□□ -0
LMO4-201ENST00000370542 ALG6Q9Y672 507 aa15.04■□□□□ -0
LMO4-201ENST00000370542 URB1O60287 2271 aaKnown RBP15.04■□□□□ -0
LMO4-201ENST00000370542 K7ERQ8 282 aa15.03■□□□□ -0
LMO4-201ENST00000370542 SMAD6O43541 496 aaKnown RBP15.03■□□□□ -0
LMO4-201ENST00000370542 MAGEC1O60732 1142 aa15.03■□□□□ -0
LMO4-201ENST00000370542 SMIM24O75264 130 aa15.03■□□□□ -0
LMO4-201ENST00000370542 ZWINTO95229 277 aa15.03■□□□□ -0
LMO4-201ENST00000370542 RHOCP08134 193 aa15.03■□□□□ -0
LMO4-201ENST00000370542 BRAFP15056 766 aa15.03■□□□□ -0
LMO4-201ENST00000370542 MMP8P22894 467 aa15.03■□□□□ -0
LMO4-201ENST00000370542 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
LMO4-201ENST00000370542 PTK6Q13882 451 aa15.03■□□□□ -0
LMO4-201ENST00000370542 RASA2Q15283 850 aa15.03■□□□□ -0
LMO4-201ENST00000370542 MANEALQ5VSG8 457 aa15.03■□□□□ -0
LMO4-201ENST00000370542 GATAD2AQ86YP4 633 aa15.03■□□□□ -0
LMO4-201ENST00000370542 FITM2Q8N6M3 262 aa15.03■□□□□ -0
LMO4-201ENST00000370542 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
LMO4-201ENST00000370542 AGPAT1Q99943 283 aa15.03■□□□□ -0
LMO4-201ENST00000370542 HDAC8Q9BY41 377 aa15.03■□□□□ -0
LMO4-201ENST00000370542 PITPNM3Q9BZ71 974 aa15.03■□□□□ -0
LMO4-201ENST00000370542 CDC42EP4Q9H3Q1 356 aaKnown RBP15.03■□□□□ -0
LMO4-201ENST00000370542 GOLPH3Q9H4A6 298 aa15.03■□□□□ -0
LMO4-201ENST00000370542 PAPOLBQ9NRJ5 636 aaKnown RBP15.03■□□□□ -0
LMO4-201ENST00000370542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.03■□□□□ -0
LMO4-201ENST00000370542 MPP6Q9NZW5 540 aa15.03■□□□□ -0
LMO4-201ENST00000370542 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
LMO4-201ENST00000370542 FTSJ1Q9UET6 329 aa15.03■□□□□ -0
LMO4-201ENST00000370542 LNPEPQ9UIQ6 1025 aa15.03■□□□□ -0
LMO4-201ENST00000370542 LRCH1Q9Y2L9 728 aa15.03■□□□□ -0
LMO4-201ENST00000370542 SPTA1P02549 2419 aa15.02■□□□□ -0
LMO4-201ENST00000370542 SMIM23A6NLE4 172 aa15.02■□□□□ -0
LMO4-201ENST00000370542 PRAMEF26H0Y7S4 382 aa15.02■□□□□ -0
LMO4-201ENST00000370542 RNF103O00237 685 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CD160O95971 181 aa15.02■□□□□ -0
LMO4-201ENST00000370542 PRNPP04156 253 aa15.02■□□□□ -0
LMO4-201ENST00000370542 ITGAVP06756 1048 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CHRNB2P17787 502 aa15.02■□□□□ -0
LMO4-201ENST00000370542 RRM1P23921 792 aa15.02■□□□□ -0
LMO4-201ENST00000370542 VHLP40337 213 aa15.02■□□□□ -0
LMO4-201ENST00000370542 FMO1Q01740 532 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CDR2Q01850 454 aa15.02■□□□□ -0
LMO4-201ENST00000370542 BNIP3Q12983 259 aa15.02■□□□□ -0
LMO4-201ENST00000370542 SPARCL1Q14515 664 aa15.02■□□□□ -0
LMO4-201ENST00000370542 GSTA3Q16772 222 aa15.02■□□□□ -0
LMO4-201ENST00000370542 SETMARQ53H47 684 aaPredicted RBP15.02■□□□□ -0
LMO4-201ENST00000370542 C2CD6Q53TS8 623 aa15.02■□□□□ -0
LMO4-201ENST00000370542 TMPRSS12Q86WS5 348 aa15.02■□□□□ -0
LMO4-201ENST00000370542 TDRPQ86YL5 185 aa15.02■□□□□ -0
LMO4-201ENST00000370542 PLPP6Q8IY26 295 aa15.02■□□□□ -0
LMO4-201ENST00000370542 ATP11CQ8NB49 1132 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CPA5Q8WXQ8 436 aa15.02■□□□□ -0
LMO4-201ENST00000370542 DNAJC9Q8WXX5 260 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CENPIQ92674 756 aaPredicted RBP15.02■□□□□ -0
LMO4-201ENST00000370542 VOPP1Q96AW1 172 aa15.02■□□□□ -0
LMO4-201ENST00000370542 ARRDC3Q96B67 414 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CFAP57Q96MR6 1250 aa15.02■□□□□ -0
LMO4-201ENST00000370542 TTC25Q96NG3 672 aa15.02■□□□□ -0
LMO4-201ENST00000370542 LRRC37BQ96QE4 947 aa15.02■□□□□ -0
LMO4-201ENST00000370542 CEP44Q9C0F1 390 aa15.02■□□□□ -0
LMO4-201ENST00000370542 SSU72Q9NP77 194 aaKnown RBP15.02■□□□□ -0
LMO4-201ENST00000370542 SCOCQ9UIL1 159 aa15.02■□□□□ -0
LMO4-201ENST00000370542 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
LMO4-201ENST00000370542 PRPF4O43172 522 aaKnown RBP eCLIP15.01□□□□□ -0.01
LMO4-201ENST00000370542 LDOC1O95751 146 aaPredicted RBP15.01□□□□□ -0.01
LMO4-201ENST00000370542 TPBGLP0DKB5 382 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
LMO4-201ENST00000370542 PTPN4P29074 926 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 OR1E1P30953 314 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 ADRA1BP35368 520 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 PEX19P40855 299 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 ACADVLP49748 655 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 OCRLQ01968 901 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 PTP4A2Q12974 167 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 ZNF284Q2VY69 593 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 C22orf39Q6P5X5 142 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 TFAP2DQ7Z6R9 452 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 CACTIN-AS1Q8N1I8 211 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 ARHGAP24Q8N264 748 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 CHST14Q8NCH0 376 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 PPFIBP2Q8ND30 876 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 OR7D4Q8NG98 312 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 TEKT4Q8WW24 435 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 PHACTR1Q9C0D0 580 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 ZYG11BQ9C0D3 744 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 YIPF3Q9GZM5 350 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 OSBPL2Q9H1P3 480 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 PDP2Q9P2J9 529 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 NEU3Q9UQ49 428 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 WASF2Q9Y6W5 498 aa15.01□□□□□ -0.01
LMO4-201ENST00000370542 TRABD2BA6NFA1 517 aa15□□□□□ -0.01
LMO4-201ENST00000370542 C2CD4BA6NLJ0 364 aa15□□□□□ -0.01
LMO4-201ENST00000370542 PEX11AO75192 247 aa15□□□□□ -0.01
LMO4-201ENST00000370542 TAC1P20366 129 aa15□□□□□ -0.01
LMO4-201ENST00000370542 GLDCP23378 1020 aa15□□□□□ -0.01
LMO4-201ENST00000370542 MAT2AP31153 395 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms