RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 TMEM159Q96B96 161 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 SMIM14Q96QK8 99 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 NPAS2Q99743 824 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 ECSITQ9BQ95 431 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 CSNK1G1Q9HCP0 422 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 FAM155AB1AL88 458 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 ZNF487B1APH4 448 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 SLC7A4O43246 635 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 MTX2O75431 263 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 GJB3O75712 270 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 SLC25A14O95258 325 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 POLR2LP62875 67 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 TPGS2Q68CL5 300 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 C6orf89Q6UWU4 347 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 NKAPQ8N5F7 415 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 DENND1AQ8TEH3 1009 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 UCMAQ8WVF2 138 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 ARNTL2Q8WYA1 636 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 KCNN1Q92952 543 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 COPS8Q99627 209 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 YIPF3Q9GZM5 350 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 TMEM248Q9NWD8 314 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 STC2O76061 302 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 PRSS56P0CW18 603 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 IL10P22301 178 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 CST5P28325 142 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 SKIV2L2P42285 1042 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 KLF10Q13118 480 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 TRMT5Q32P41 509 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 LACTB2Q53H82 288 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 RINLQ6ZS11 566 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 RD3Q7Z3Z2 195 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 TMEM135Q86UB9 458 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 FAM126BQ8IXS8 530 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 SIDT2Q8NBJ9 832 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 OR56A4Q8NGH8 313 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 C2orf15Q8WU43 125 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 RTP4Q96DX8 246 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 CASD1Q96PB1 797 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 TMEM175Q9BSA9 504 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 RNPEPL1Q9HAU8 725 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 APPL1Q9UKG1 709 aa7.12□□□□□ -1.27
TGFBR3-202ENST00000370399 OR2AG2A6NM03 316 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SEC22BO75396 215 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 MYO1DO94832 1006 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 OR56A5P0C7T3 313 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 NEK3P51956 506 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 MGAT3Q09327 533 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 ABRQ12979 859 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 MED21Q13503 144 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 TAZQ16635 292 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SLC9B1Q4ZJI4 515 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 ATP6AP1LQ52LC2 224 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SETMARQ53H47 684 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 RALGPS1Q5JS13 557 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 RAB41Q5JT25 222 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 IZUMO2Q6UXV1 221 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 GET4Q7L5D6 327 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 HPS6Q86YV9 775 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SPNS2Q8IVW8 549 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 DNAJB14Q8TBM8 379 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 PTCD2Q8WV60 388 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 ELMO1Q92556 727 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 PLD4Q96BZ4 506 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 TSGA13Q96PP4 275 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 C17orf80Q9BSJ5 609 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 DENND2DQ9H6A0 471 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 WDR41Q9HAD4 459 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 MRPL40Q9NQ50 206 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 POLR3BQ9NW08 1133 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 GID8Q9NWU2 228 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 DLGAP2Q9P1A6 1054 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 OPTCQ9UBM4 332 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SPASTQ9UBP0 616 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 PCDHGB4Q9UN71 923 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 WNT6Q9Y6F9 365 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 ANKRD66B4E2M5 251 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 TP73O15350 636 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 DLX3O60479 287 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 PIK3R1P27986 724 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 IDH3AP50213 366 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 LSM12Q3MHD2 195 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 GK5Q6ZS86 529 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 KIAA0408Q6ZU52 694 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 GRASPQ7Z6J2 395 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 BBS7Q8IWZ6 715 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 UMODL1-AS1Q8N2C9 162 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 STK40Q8N2I9 435 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 CYB5D2Q8WUJ1 264 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 SUSD6Q92537 303 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 PRR11Q96HE9 360 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 CNDP1Q96KN2 507 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 OR52B2Q96RD2 323 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 KIFC1Q9BW19 673 aa7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 FAM126AQ9BYI3 521 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-202ENST00000370399 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms