RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 GALNT7Q86SF2 657 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 PRPF39Q86UA1 669 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 CCDC25Q86WR0 208 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 LRRC6Q86X45 466 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SLC44A1Q8WWI5 657 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SORCS1Q8WY21 1168 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 CENPTQ96BT3 561 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ALKBH8Q96BT7 664 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 STAMBPL1Q96FJ0 436 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SCNM1Q9BWG6 230 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 CNOT10Q9H9A5 744 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 ABCB8Q9NUT2 735 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 ZC3H7BQ9UGR2 993 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 CLEC4EQ9ULY5 219 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SOX13Q9UN79 622 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 RPL26L1Q9UNX3 145 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 HS3ST2Q9Y278 367 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SLC27A6Q9Y2P4 619 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ZZEF1O43149 2961 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ADAMTS20P59510 1910 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 MYLKQ15746 1914 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 A0A0D9SEW6 157 aa8.83□□□□□ -1
SNX27-201ENST00000368838 J3KR12 359 aa8.83□□□□□ -1
SNX27-201ENST00000368838 RGS16O15492 202 aaPredicted RBP8.83□□□□□ -1
SNX27-201ENST00000368838 TSPAN3O60637 253 aa8.83□□□□□ -1
SNX27-201ENST00000368838 ACSL3O95573 720 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CPP00450 1065 aa8.83□□□□□ -1
SNX27-201ENST00000368838 SHBGP04278 402 aa8.83□□□□□ -1
SNX27-201ENST00000368838 FGF1P05230 155 aa8.83□□□□□ -1
SNX27-201ENST00000368838 PROS1P07225 676 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MMP2P08253 660 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CEACAM1P13688 526 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CSRP1P21291 193 aaKnown RBP8.83□□□□□ -1
SNX27-201ENST00000368838 ADRA1DP25100 572 aa8.83□□□□□ -1
SNX27-201ENST00000368838 GCAP28676 217 aa8.83□□□□□ -1
SNX27-201ENST00000368838 IL12RB1P42701 662 aa8.83□□□□□ -1
SNX27-201ENST00000368838 POLD2P49005 469 aa8.83□□□□□ -1
SNX27-201ENST00000368838 SERPINB9P50453 376 aa8.83□□□□□ -1
SNX27-201ENST00000368838 ATP1A2P50993 1020 aa8.83□□□□□ -1
SNX27-201ENST00000368838 AP1S1P61966 158 aa8.83□□□□□ -1
SNX27-201ENST00000368838 SIM1P81133 766 aaPredicted RBP8.83□□□□□ -1
SNX27-201ENST00000368838 ARF5P84085 180 aa8.83□□□□□ -1
SNX27-201ENST00000368838 ACVR1Q04771 509 aa8.83□□□□□ -1
SNX27-201ENST00000368838 LMAN2Q12907 356 aa8.83□□□□□ -1
SNX27-201ENST00000368838 FASTKD3Q14CZ7 662 aaKnown RBP8.83□□□□□ -1
SNX27-201ENST00000368838 BBS9Q3SYG4 887 aa8.83□□□□□ -1
SNX27-201ENST00000368838 LGSNQ5TDP6 509 aa8.83□□□□□ -1
SNX27-201ENST00000368838 SLC23A3Q6PIS1 610 aa8.83□□□□□ -1
SNX27-201ENST00000368838 UNC5AQ6ZN44 842 aa8.83□□□□□ -1
SNX27-201ENST00000368838 TIFABQ6ZNK6 161 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MARK2Q7KZI7 788 aaKnown RBP8.83□□□□□ -1
SNX27-201ENST00000368838 PKD1L2Q7Z442 2459 aa8.83□□□□□ -1
SNX27-201ENST00000368838 SLC26A11Q86WA9 606 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CNTN4Q8IWV2 1026 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MINDY1Q8N5J2 469 aa8.83□□□□□ -1
SNX27-201ENST00000368838 OR52K2Q8NGK3 314 aa8.83□□□□□ -1
SNX27-201ENST00000368838 ARL8AQ96BM9 186 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MTBPQ96DY7 904 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MRGPRX1Q96LB2 322 aa8.83□□□□□ -1
SNX27-201ENST00000368838 PWWP2AQ96N64 755 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CAMK1GQ96NX5 476 aa8.83□□□□□ -1
SNX27-201ENST00000368838 AGAP3Q96P47 875 aa8.83□□□□□ -1
SNX27-201ENST00000368838 NUDCD1Q96RS6 583 aa8.83□□□□□ -1
SNX27-201ENST00000368838 TRIB3Q96RU7 358 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CEP44Q9C0F1 390 aa8.83□□□□□ -1
SNX27-201ENST00000368838 CD248Q9HCU0 757 aa8.83□□□□□ -1
SNX27-201ENST00000368838 MKS1Q9NXB0 559 aa8.83□□□□□ -1
SNX27-201ENST00000368838 NSMCE4AQ9NXX6 385 aa8.83□□□□□ -1
SNX27-201ENST00000368838 EVLQ9UI08 416 aaPredicted RBP8.83□□□□□ -1
SNX27-201ENST00000368838 SLC6A14Q9UN76 642 aa8.83□□□□□ -1
SNX27-201ENST00000368838 WASF3Q9UPY6 502 aa8.83□□□□□ -1
SNX27-201ENST00000368838 STARD13Q9Y3M8 1113 aa8.83□□□□□ -1
SNX27-201ENST00000368838 STON1Q9Y6Q2 735 aa8.83□□□□□ -1
SNX27-201ENST00000368838 ZCWPW2A0A1B0GU75 182 aa8.82□□□□□ -1
SNX27-201ENST00000368838 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.82□□□□□ -1
SNX27-201ENST00000368838 EXOC1LA0A1B0GW35 172 aa8.82□□□□□ -1
SNX27-201ENST00000368838 H0Y626 953 aa8.82□□□□□ -1
SNX27-201ENST00000368838 SHOX2O60902 331 aaPredicted RBP8.82□□□□□ -1
SNX27-201ENST00000368838 TBL1XO60907 577 aa8.82□□□□□ -1
SNX27-201ENST00000368838 SOCS5O75159 536 aa8.82□□□□□ -1
SNX27-201ENST00000368838 NDUFS2O75306 463 aa8.82□□□□□ -1
SNX27-201ENST00000368838 SERPINF2P08697 491 aa8.82□□□□□ -1
SNX27-201ENST00000368838 HLA-EP13747 358 aa8.82□□□□□ -1
SNX27-201ENST00000368838 SSTR1P30872 391 aa8.82□□□□□ -1
SNX27-201ENST00000368838 ACVRL1P37023 503 aa8.82□□□□□ -1
SNX27-201ENST00000368838 HADHAP40939 763 aa8.82□□□□□ -1
SNX27-201ENST00000368838 GRIA1P42261 906 aa8.82□□□□□ -1
SNX27-201ENST00000368838 LMAN1P49257 510 aa8.82□□□□□ -1
SNX27-201ENST00000368838 WNT3AP56704 352 aa8.82□□□□□ -1
SNX27-201ENST00000368838 CDH18Q13634 790 aa8.82□□□□□ -1
SNX27-201ENST00000368838 GRM3Q14832 879 aa8.82□□□□□ -1
SNX27-201ENST00000368838 E2F5Q15329 346 aa8.82□□□□□ -1
SNX27-201ENST00000368838 DUOXA1Q1HG43 343 aa8.82□□□□□ -1
SNX27-201ENST00000368838 PLEKHG6Q3KR16 790 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms