RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 DRGXA6NNA5 263 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 H3BNC9 293 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 AURKAO14965 403 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 LSM1O15116 133 aaKnown RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 SERPINE1P05121 402 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 PRSS56P0CW18 603 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CPA3P15088 417 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CSKP41240 450 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 MPP1Q00013 466 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 PEX6Q13608 980 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 TEDDM1Q5T9Z0 273 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 AFMIDQ63HM1 303 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 NAPEPLDQ6IQ20 393 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 IYDQ6PHW0 289 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 LILRA6Q6PI73 481 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ITIH5Q86UX2 942 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-212ENST00000368533 TDRD5Q8NAT2 981 aaKnown RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 SH3RF2Q8TEC5 729 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 MOCOSQ96EN8 888 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 ABHD8Q96I13 439 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 TSGA13Q96PP4 275 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 GCNAQ96QF7 691 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 CASS4Q9NQ75 786 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-212ENST00000368533 APPL1Q9UKG1 709 aa10.68□□□□□ -0.7
TPM3-212ENST00000368533 YBX2Q9Y2T7 364 aaKnown RBP10.68□□□□□ -0.7
TPM3-212ENST00000368533 MYLKQ15746 1914 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 PDE5AO76074 875 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SERPINA6P08185 405 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 VCLP18206 1134 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GP5P40197 560 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CLCN4P51793 760 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 NDST2P52849 883 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CYLC2Q14093 348 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 ANO4Q32M45 955 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 DNAL1Q4LDG9 190 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 DENND5AQ6IQ26 1287 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 B3GNT6Q6ZMB0 384 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 PTAR1Q7Z6K3 402 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 DCLK2Q8N568 766 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 EFHBQ8N7U6 833 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SMYD1Q8NB12 490 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM3-212ENST00000368533 PIP4K2CQ8TBX8 421 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 DGCR14Q96DF8 476 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 TNKS2Q9H2K2 1166 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SLC7A8Q9UHI5 535 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 EMCNQ9ULC0 261 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 MTF2Q9Y483 593 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 ARL5AQ9Y689 179 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ATG2BQ96BY7 2078 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 TNRC18O15417 2968 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 COL6A3P12111 3177 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CAPN14A8MX76 684 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 E9PBE3 544 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 LEFTY2O00292 366 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 KLHL41O60662 606 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SNNO75324 88 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 RHOP08100 348 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 MMP2P08253 660 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CRABP2P29373 138 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 STT3AP46977 705 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 STK19P49842 368 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 ZNF135P52742 658 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 PDK3Q15120 406 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 LRRC73Q5JTD7 316 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 MBLAC2Q68D91 279 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GRAMD4Q6IC98 578 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CXorf57Q6NSI4 855 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 KCNMB4Q86W47 210 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 RYBPQ8N488 228 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 SLC26A7Q8TE54 656 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ZFYVE19Q96K21 471 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SCYL1Q96KG9 808 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 FCRL5Q96RD9 977 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 VAT1Q99536 393 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 CINPQ9BW66 212 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 SNX15Q9NRS6 342 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 AAR2Q9Y312 384 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 RAD54BQ9Y620 910 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 TRIOBPQ9H2D6 2365 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 A0A1B0GTW7 788 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ZCWPW2A0A1B0GU75 182 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 NEMP1O14524 444 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 GPR39O43194 453 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SMAD6O43541 496 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 ANXA9O76027 345 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 PROCP04070 461 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 TFAP2AP05549 437 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 FGF3P11487 239 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 MLNP12872 115 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms