RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SOD1P00441 154 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 EPOP01588 193 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 HOXC4P09017 264 aaPredicted RBP22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 JUNDP17535 347 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 PSMB4P28070 264 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 GDF10P55107 478 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 KIAA1024LP59773 190 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 SIX1Q15475 284 aaPredicted RBP22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 RAVER1Q8IY67 606 aaKnown RBP22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 PHACTR4Q8IZ21 702 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 SCAMP4Q969E2 229 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 FERMT1Q9BQL6 677 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 TMEM121Q9BTD3 319 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 MAGEE1Q9HCI5 957 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 TOR4AQ9NXH8 423 aa22.39■■□□□ 1.18
ECHDC1-203ENST00000368291 PTPRBP23467 1997 aa22.39■■□□□ 1.17
ECHDC1-203ENST00000368291 MYLKQ15746 1914 aa22.39■■□□□ 1.17
ECHDC1-203ENST00000368291 TMEM202A6NGA9 273 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TSHRP16473 764 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 CHRNA4P43681 627 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ALG11Q2TAA5 492 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 INAVAQ3KP66 663 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ITPRIPL1Q6GPH6 555 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ENPP7Q6UWV6 458 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF765Q7L2R6 523 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 NLRP8Q86W28 1048 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 FAM71DQ8N9W8 422 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF548Q8NEK5 533 aaPredicted RBP22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TSACCQ96A04 125 aaPredicted RBP22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 AGAP2Q99490 1192 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 CDC6Q99741 560 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TEX101Q9BY14 249 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SHOC2Q9UQ13 582 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SPO11Q9Y5K1 396 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TRIM38O00635 465 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 LIASO43766 372 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TEAD1P28347 426 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SPINT3P49223 89 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 PPARDQ03181 441 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 OASLQ15646 514 aaKnown RBP22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SLC1A5Q15758 541 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SIRPB2Q5JXA9 342 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TMC3Q7Z5M5 1100 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 SLCO6A1Q86UG4 719 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 HEATR4Q86WZ0 1026 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 KLHDC8BQ8IXV7 354 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 NRSN1Q8IZ57 195 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 IPMKQ8NFU5 416 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 AP2M1Q96CW1 435 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 WDR92Q96MX6 357 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 WDR26Q9H7D7 661 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ZFYVE1Q9HBF4 777 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 TRMT1Q9NXH9 659 aaKnown RBP22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF711Q9Y462 761 aa22.38■■□□□ 1.17
ECHDC1-203ENST00000368291 ARHGEF17Q96PE2 2063 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ZFC3H1O60293 1989 aaKnown RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 H3BM21 787 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 CACNB4O00305 520 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ENC1O14682 589 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 AURKAO14965 403 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ZSCAN12O43309 604 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 GCATO75600 419 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF189O75820 626 aaPredicted RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ANXA9O76027 345 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 STK10O94804 968 aaKnown RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 HTR1BP28222 390 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 CXCR5P32302 372 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 ADRA1AP35348 466 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 GEMP55040 296 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 RAET1GQ6H3X3 334 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 SLC25A41Q8N5S1 370 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 BTN2A2Q8WVV5 523 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 C1orf54Q8WWF1 131 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 OR1E3Q8WZA6 343 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 PDXPQ96GD0 296 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 LRRC61Q9BV99 259 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 CLPBQ9H078 707 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 FGF22Q9HCT0 170 aa22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 APOBEC3BQ9UH17 382 aaKnown RBP22.37■■□□□ 1.17
ECHDC1-203ENST00000368291 NCOR2Q9Y618 2525 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 SCAMP1O15126 338 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 TNFSF14O43557 240 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 AGTP01019 485 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 MYCLP1P12525 358 aaPredicted RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 HK3P52790 923 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 SRP54P61011 504 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 CDK3Q00526 305 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 OLIG2Q13516 323 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 HENMT1Q5T8I9 393 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 FAXCQ5TGI0 409 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 CCDC70Q6NSX1 233 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 OR56A4Q8NGH8 313 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 OR4C6Q8NH72 309 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 CCHCR1Q8TD31 782 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 RTP4Q96DX8 246 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 TBATAQ96M53 351 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 RIOK2Q9BVS4 552 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 FRMD8P1Q9BZ68 369 aaPredicted RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 MRPL40Q9NQ50 206 aaKnown RBP22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 KLQ9UEF7 1012 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms