RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SPATA7Q9P0W8 599 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NAALAD2Q9Y3Q0 740 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 LRIG2O94898 1065 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CLCN5P51795 746 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EGFLAMQ63HQ2 1017 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TMUB2Q71RG4 321 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HASPINQ8TF76 798 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FATE1Q969F0 183 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PDGFCQ9NRA1 345 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FAM50BQ9Y247 325 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC45A1Q9Y2W3 748 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CABYRO75952 493 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FAM153BP0C7A2 387 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CPA2P48052 419 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF844Q08AG5 666 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FAM153CQ494X1 144 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SPANXN3Q5MJ09 141 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KLHDC7AQ5VTJ3 777 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SCARA5Q6ZMJ2 495 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC13A5Q86YT5 568 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SVBPQ8N300 66 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OR2T34Q8NGX1 318 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OR2T3Q8NH03 318 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PKIBQ9C010 78 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D24Q9ULP9 559 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CLIC3O95833 236 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MLLT3P42568 568 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GIT2Q14161 759 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GRK1Q15835 563 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PRR5LQ6MZQ0 368 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SPOCD1Q6ZMY3 1216 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 LIX1Q8N485 282 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OR51D1Q8NGF3 324 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GPKOWQ92917 476 aaPredicted RBP eCLIP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CPSF3Q9UKF6 684 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 YARS2Q9Y2Z4 477 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PXDNQ92626 1479 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 BLACEA4D250 179 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GLRA2P23416 452 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PAX6P26367 422 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RRP1BQ14684 758 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HAGHQ16775 308 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HYIQ5T013 277 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 BBS12Q6ZW61 710 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RNF215Q9Y6U7 377 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC35F4A4IF30 521 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 C1orf196B1AJZ1 125 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DYRK3O43781 588 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CKBP12277 381 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 JUNDP17535 347 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KCNJ1P48048 391 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SCNN1GP51170 649 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TSTA3Q13630 321 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SMG8Q8ND04 991 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 WDR20Q8TBZ3 569 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GANCQ8TET4 914 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DGCR6LQ9BY27 220 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SPACA6W5XKT8 324 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PSMD9O00233 223 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POLR1CO15160 346 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ARL6IP5O75915 188 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ALDH1A3P47895 512 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DGLUCYQ7Z3D6 616 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM46Q7Z4K8 759 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DENND6BQ8NEG7 585 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 LHX5Q9H2C1 402 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHGA12O60330 932 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MAFO75444 373 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PAGE2BQ5JRK9 111 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NEUROD4Q9HD90 331 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 BABAM2Q9NXR7 383 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DERAQ9Y315 318 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CNTNAP2Q9UHC6 1331 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EXTL3O43909 919 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EDF1O60869 148 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OATP04181 439 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CRHR1P34998 444 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TFAMQ00059 246 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ATPAF2Q8N5M1 289 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OR8J3Q8NGG0 315 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MTERF1Q99551 399 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MUSKO15146 869 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SDC4P31431 198 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC7A2P52569 658 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IRF4Q15306 451 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CXorf40AQ8TE69 158 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ZHX1-C8orf76Q96EF9 292 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NPAS2Q99743 824 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 OSBPL7Q9BZF2 842 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KCNIP2Q9NS61 270 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DHX15O43143 795 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PIM1P11309 404 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CTNNB1P35222 781 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EEFSECP57772 596 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TTLQ8NG68 377 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF514Q96K75 400 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NEUROG2Q9H2A3 272 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 C8orf33Q9H7E9 229 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MYO3AQ8NEV4 1616 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms