RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CAMK2GQ13555 558 aaPredicted RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 IHHQ14623 411 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 POU6F1Q14863 301 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 CRYMQ14894 314 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 FASTKD3Q14CZ7 662 aaKnown RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 QPCTQ16769 361 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 POM121L1PQ3SYA9 428 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 TTC31Q49AM3 519 aaPredicted RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 MSS51Q4VC12 460 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PCID2Q5JVF3 399 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 HP1BP3Q5SSJ5 553 aaPredicted RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 BEND6Q5SZJ8 279 aaPredicted RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 CERCAMQ5T4B2 595 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 DENND5AQ6IQ26 1287 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 NLRP9Q7RTR0 991 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 ANKMY2Q8IV38 441 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 MMAAQ8IVH4 418 aaKnown RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PALM2Q8IXS6 379 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 MPP5Q8N3R9 675 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PNPLA1Q8N8W4 532 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 FBXO36Q8NEA4 188 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 MDGA1Q8NFP4 955 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 OR2T3Q8NH03 318 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 GSDMBQ8TAX9 411 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PIP4K2CQ8TBX8 421 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 BRSK1Q8TDC3 778 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PIH1D2Q8WWB5 315 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 GATA6Q92908 595 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PEX13Q92968 403 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 LOXL4Q96JB6 756 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 C9orf72Q96LT7 481 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 NSMCE3Q96MG7 304 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 RANBP9Q96S59 729 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 IER2Q9BTL4 223 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 TXLNGYQ9BZA5 131 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 RSPH9Q9H1X1 276 aaPredicted RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PABPC3Q9H361 631 aaKnown RBP6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 TRABDQ9H4I3 376 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 VPS37BQ9H9H4 285 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 NINJ2Q9NZG7 142 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 PPM1HQ9ULR3 514 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 MMP17Q9ULZ9 603 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 SOX13Q9UN79 622 aa6.79□□□□□ -1.32
RNU1-55P-201ENST00000365510 CKAP5Q14008 2032 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 C1orf232A0A0U1RR37 186 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 TCRBV21S2A2A0A5A6 115 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 C2orf81A6NN90 581 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 C16orf96A6NNT2 1141 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 KHNYNO15037 678 aaKnown RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 RIPK2O43353 540 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 USP1O94782 785 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 RHOBTB1O94844 696 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 APBB3O95704 486 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 DNTTP04053 509 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PRKCGP05129 697 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 IVLP07476 585 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PIRTP0C851 137 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZNF30P17039 623 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 TPH1P17752 444 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 CTPS1P17812 591 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 C5AR1P21730 350 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ITPKAP23677 461 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ADRA1DP25100 572 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 MAOBP27338 520 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 HSD17B3P37058 310 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 NEK3P51956 506 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZBTB16Q05516 673 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ELP6Q0PNE2 266 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ARHGEF7Q14155 803 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 TAF1AQ15573 450 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 CST6Q15828 149 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 UGP2Q16851 508 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SPANXN3Q5MJ09 141 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 STEAP4Q687X5 459 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PMS2CLQ68D20 193 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 FBXL19Q6PCT2 694 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 UNC5AQ6ZN44 842 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 CAPN12Q6ZSI9 719 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SYT13Q7L8C5 426 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 CACUL1Q86Y37 369 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 TSTD1Q8NFU3 115 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 GABPB2Q8TAK5 448 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 HMGB4Q8WW32 186 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZNF669Q96BR6 464 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SIGLEC10Q96LC7 697 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 MCCC1Q96RQ3 725 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 LYSMD1Q96S90 227 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 RUFY1Q96T51 708 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 WDR83Q9BRX9 315 aaKnown RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 KIFC1Q9BW19 673 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 GTPBP2Q9BX10 602 aaKnown RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 HDAC8Q9BY41 377 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms