RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 UBA7P41226 1012 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 GARSP41250 739 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 KCNJ4P48050 445 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 THBS3P49746 956 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 DRG2P55039 364 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 LTBQ06643 244 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 GRSF1Q12849 480 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 FHL1Q13642 323 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 KRT24Q2M2I5 525 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 XKR9Q5GH70 373 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 LRIF1Q5T3J3 769 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 WDR78Q5VTH9 848 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 METTL2BQ6P1Q9 378 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SLC36A4Q6YBV0 504 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 GLDNQ6ZMI3 551 aaPredicted RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SAMD14Q8IZD0 417 aaPredicted RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 DSELQ8IZU8 1212 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SCFD2Q8WU76 684 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 RRNAD1Q96FB5 475 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SCMH1Q96GD3 660 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 METTL2AQ96IZ6 378 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 ACOX2Q99424 681 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZPBPQ9BS86 351 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 PCGF1Q9BSM1 259 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SEZ6LQ9BYH1 1024 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 WDR26Q9H7D7 661 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 KAT14Q9H8E8 782 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 HAUS2Q9NVX0 235 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 TTC7AQ9ULT0 858 aaPredicted RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 MAU2Q9Y6X3 613 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 ARHGEF40Q8TER5 1519 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 ATXN2Q99700 1313 aaKnown RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 SMCHD1A6NHR9 2005 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 A0A0U1RQJ8 604 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 A6NCN8 305 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 PLRG1O43660 514 aaKnown RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 PLA2G2AP14555 144 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 BRWD1-AS2P59051 145 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 NFATC4Q14934 902 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 AMZ1Q400G9 498 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 SETMARQ53H47 684 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 EFHC1Q5JVL4 640 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 GGNBP1Q5YKI7 109 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 SIGIRRQ6IA17 410 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 KIAA0930Q6ICG6 404 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 WDR73Q6P4I2 378 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 DPPA4Q7L190 304 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZDHHC17Q8IUH5 632 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 HJURPQ8NCD3 748 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 POMGNT1Q8WZA1 660 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 PHF21BQ96EK2 531 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 TREX2Q9BQ50 279 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 SPRY4Q9C004 299 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 ACSS1Q9NUB1 689 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 R3HDM2Q9Y2K5 976 aaKnown RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 GREB1LQ9C091 1923 aaPredicted RBP4.3□□□□□ -1.72
RNU6-560P-201ENST00000364007 ANKRD18BA2A2Z9 1011 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SRRM3A6NNA2 597 aaPredicted RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 GTPBP1O00178 669 aaKnown RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 VILLO15195 856 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 NDUFS3O75489 264 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 JRKO75564 520 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 CLDN14O95500 239 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 CLTBP09497 229 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 MCM3P25205 808 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 TNFRSF8P28908 595 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 HOXD13P35453 343 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 CASP2P42575 452 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 MYBPHQ13203 477 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 NAB2Q15742 525 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 MEA1Q16626 185 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 PPP6R3Q5H9R7 873 aaPredicted RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 DUS1LQ6P1R4 473 aaKnown RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 RHBDF2Q6PJF5 856 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 CHST9Q7L1S5 443 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 CHERPQ8IWX8 916 aaKnown RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 BEST3Q8N1M1 668 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZNF114Q8NC26 417 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SMRP1Q8NCR6 262 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 OR2AK2Q8NG84 335 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 HMGCLL1Q8TB92 370 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 RHBDF1Q96CC6 855 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 ELMOD3Q96FG2 381 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 TIGD1Q96MW7 591 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 FIZ1Q96SL8 496 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SRSF8Q9BRL6 282 aaKnown RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 MMTAG2Q9BU76 263 aaKnown RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 IL25Q9H293 177 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SH2D4AQ9H788 454 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 C17orf75Q9HAS0 396 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 SETD4Q9NVD3 440 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms