RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DGCR14Q96DF8 476 aaKnown RBP16.33■□□□□ 0.21
SCAF1-201ENST00000360565 MAGED4Q96JG8 741 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 NPY6RQ99463 290 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 TTPALQ9BTX7 342 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 UNC93B1Q9H1C4 597 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 EPB41L4BQ9H329 900 aa16.33■□□□□ 0.21
SCAF1-201ENST00000360565 TAF1P21675 1872 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 VAV1P15498 845 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 PBX3P40426 434 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
SCAF1-201ENST00000360565 PITX1P78337 314 aaPredicted RBP16.33■□□□□ 0.2
SCAF1-201ENST00000360565 CLDN10P78369 228 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 PFKPQ01813 784 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 DGCR6Q14129 220 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 ABRAXAS1Q6UWZ7 409 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
SCAF1-201ENST00000360565 OSGEPL1Q9H4B0 414 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 ATP13A3Q9H7F0 1226 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 SNX8Q9Y5X2 465 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 HNRNPCL2B2RXH8 293 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 FAM20BO75063 409 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 RFPL1O75677 317 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 MT-ND1P03886 318 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 COX7A2P14406 83 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 RRM2P31350 389 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 ARHGAP36Q6ZRI8 547 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 CPSF7Q8N684 471 aaKnown RBP16.33■□□□□ 0.2
SCAF1-201ENST00000360565 STYXQ8WUJ0 223 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 ESAMQ96AP7 390 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 OXSMQ9NWU1 459 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 GDAP2Q9NXN4 497 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 PPM1HQ9ULR3 514 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 CLCA2Q9UQC9 943 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
SCAF1-201ENST00000360565 FAM149AA5PLN7 773 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 UBXN8O00124 270 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 MAP3K13O43283 966 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 CATP04040 527 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 ABCG8Q9H221 673 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 VRTNQ9H8Y1 702 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 RAI2Q9Y5P3 530 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 C9IYK1 514 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 SLC7A4O43246 635 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 TBX18O95935 607 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 IFNA14P01570 189 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 ADARP55265 1226 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 GJA9P57773 515 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 SNRPD1P62314 119 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 HPCAP84074 193 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 NRG1Q02297 640 aaPredicted RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 SP3Q02447 781 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 BNIPLQ7Z465 357 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 PHTF2Q8N3S3 785 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 SETD9Q8NE22 299 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 DENND1AQ8TEH3 1009 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 EPS8L2Q9H6S3 715 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 OR51F1A6NGY5 319 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 CNOT3O75175 753 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 EPN2O95208 641 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 GOT2P00505 430 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 KRT8P05787 483 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 GPR15P49685 360 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 NAA20P61599 178 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 GNA12Q03113 381 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 TRIM25Q14258 630 aaKnown RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 PITRM1Q5JRX3 1037 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 SFRP1Q8N474 314 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 BPIFB6Q8NFQ5 453 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 H2AFY2Q9P0M6 372 aaPredicted RBP16.32■□□□□ 0.2
SCAF1-201ENST00000360565 NWD2Q9ULI1 1742 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 MYH7BA7E2Y1 1941 aa16.32■□□□□ 0.2
SCAF1-201ENST00000360565 BBIP1A8MTZ0 92 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 SNAP91O60641 907 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 AHSGP02765 367 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 CLCQ05315 142 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ACOX1Q15067 660 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 FRMD7Q6ZUT3 714 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TRIM69Q86WT6 500 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ELMO1Q92556 727 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 GIMAP4Q9NUV9 329 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 SNX6Q9UNH7 406 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TPRKBQ9Y3C4 175 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 POLR3HQ9Y535 204 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 CHD4Q14839 1912 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 LINC00854A0A1B0GVQ3 168 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 HLA-DQB2P05538 268 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TTKP33981 857 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TJAP1Q5JTD0 557 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 PPM1LQ5SGD2 360 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 RBFAQ8N0V3 343 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms