RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 BAIAP2Q9UQB8 552 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 NFASCO94856 1347 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CLDN5O00501 218 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ICAM3P32942 547 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 PPP3CAQ08209 521 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 PLIN3O60664 434 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 IDO1P14902 403 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ITPKAP23677 461 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 MC4RP32245 332 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ATP5C1P36542 298 aaKnown RBP16.03■□□□□ 0.16
COL18A1-203ENST00000359759 CCR3P51677 355 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 RAB25P57735 213 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TYSND1Q2T9J0 566 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ATCAYQ86WG3 371 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 SGK2Q9HBY8 427 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TFPIP10646 304 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 SDC2P34741 201 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 BEX3Q00994 111 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 GAD1Q99259 594 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 GAL3ST1Q99999 423 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 CPSF4LA6NMK7 179 aaKnown RBP16.03■□□□□ 0.16
COL18A1-203ENST00000359759 BCKDKO14874 412 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 NKD1Q969G9 470 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 S100A14Q9HCY8 104 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 DNMT3LQ9UJW3 386 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 SLC27A5Q9Y2P5 690 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 MDM4O15151 490 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 HDAC3O15379 428 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 IFNGP01579 166 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 IGFBP5P24593 272 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 RTKNQ9BST9 563 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TRPV5Q9NQA5 729 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF490Q9ULM2 529 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-203ENST00000359759 MAP2K7O14733 419 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 DCLK1O15075 740 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 FFAR2O15552 330 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 IL1BP01584 269 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 FTH1P02794 183 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 THRBP10828 461 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TNFRSF8P28908 595 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 ILF2Q12905 390 aaKnown RBP16.03■□□□□ 0.16
COL18A1-203ENST00000359759 TIGD2Q4W5G0 525 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 CNPPD1Q9BV87 410 aa16.03■□□□□ 0.16
COL18A1-203ENST00000359759 PDHXO00330 501 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 MAZP56270 477 aaKnown RBP16.02■□□□□ 0.16
COL18A1-203ENST00000359759 MTA1Q13330 715 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 SNAPC1Q16533 368 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 ANXA8L1Q5VT79 327 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 FAM91A1Q658Y4 838 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 PLET1Q6UQ28 207 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 ARCQ7LC44 396 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 FAM124AQ86V42 546 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 HDAC10Q969S8 669 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 UCKL1Q9NWZ5 548 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 PCYOX1Q9UHG3 505 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 HES2Q9Y543 173 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 PLA2R1Q13018 1463 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 SCNN1GP51170 649 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 CRELD2Q6UXH1 353 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-203ENST00000359759 KCNK18Q7Z418 384 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 SUN5Q8TC36 379 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 RNF157Q96PX1 679 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 PRRG4Q9BZD6 226 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 ATP13A3Q9H7F0 1226 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 RAB23Q9ULC3 237 aa16.02■□□□□ 0.16
COL18A1-203ENST00000359759 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-203ENST00000359759 ITGAVP06756 1048 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF143P52747 638 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-203ENST00000359759 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 B3GALT6Q96L58 329 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ALG2Q9H553 416 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 CKLFQ9UBR5 152 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 FADS3Q9Y5Q0 445 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ADRB2P07550 413 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 DPYSQ14117 519 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 OR10H5Q8NGA6 315 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 AKT1S1Q96B36 256 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ZYG11BQ9C0D3 744 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ASB7Q9H672 318 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 C11orf16Q9NQ32 467 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 FKBP14Q9NWM8 211 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 PRAMEF33A0A0G2JMD5 474 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 PRAMEF10O60809 474 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 SAGP10523 405 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-203ENST00000359759 AP2S1P53680 142 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-203ENST00000359759 PRKG2Q13237 762 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 OGFOD2Q6N063 350 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 YTHDF3Q7Z739 585 aaKnown RBP16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF366Q8N895 744 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 CCNB1IP1Q9NPC3 277 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 MALT1Q9UDY8 824 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms