RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ATAD1Q8NBU5 361 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 OR4L1Q8NH43 312 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 SPPL2BQ8TCT7 592 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 KCTD13Q8WZ19 329 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 CASP10Q92851 521 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 GLMNQ92990 594 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 ERLEC1Q96DZ1 483 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 CYP2S1Q96SQ9 504 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 PAAF1Q9BRP4 392 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 ABCG8Q9H221 673 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 ALG2Q9H553 416 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 CXorf21Q9HAI6 301 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 UBAP1Q9NZ09 502 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 EP400Q96L91 3159 aa6.83□□□□□ -1.32
RTN4-203ENST00000357376 TTC36A6NLP5 189 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 IRAK2O43187 625 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CNMDO75829 334 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ZBTB11O95625 1053 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 SNAI1O95863 264 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 IDO1P14902 403 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RPL10P27635 214 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 AKT1P31749 480 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 C1QTNF8P60827 252 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 NAA20P61599 178 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PPP1R8Q12972 351 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 BNIP2Q12982 314 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ARHGEF7Q14155 803 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 KIAA0408Q6ZU52 694 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 KDM1BQ8NB78 822 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ARRDC4Q8NCT1 418 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 OR4K2Q8NGD2 314 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TMIGD2Q96BF3 282 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RPL10LQ96L21 214 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 GPR21Q99679 349 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 OLFM1Q99784 485 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC25A51Q9H1U9 297 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SPON1Q9HCB6 807 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TIMMDC1Q9NPL8 285 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 COMMD8Q9NX08 183 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SMPD4Q9NXE4 827 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 LEF1Q9UJU2 399 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 EIF3LQ9Y262 564 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC22A2O15244 555 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC22A3O75751 556 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ITGBL1O95965 494 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 RHOCP08134 193 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RGS4P49798 205 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 HUNKP57058 714 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 IL2P60568 153 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CLCQ05315 142 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PRKG2Q13237 762 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ZNF177Q13360 481 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 PCBP1Q15365 356 aaKnown RBP eCLIP6.82□□□□□ -1.32
RTN4-203ENST00000357376 PGS1Q32NB8 556 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RABL3Q5HYI8 236 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 FAM171A1Q5VUB5 890 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CPSF7Q8N684 471 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 RTL3Q8N8U3 475 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 SNX19Q92543 992 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 FBXL20Q96IG2 436 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ASB2Q96Q27 587 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 HOPXQ9BPY8 73 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 DPY30Q9C005 99 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CLPBQ9H078 707 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 FBXO44Q9H4M3 255 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PLGRKTQ9HBL7 147 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 GMIPQ9P107 970 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SUCOQ9UBS9 1254 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 POLG2Q9UHN1 485 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CRLS1Q9UJA2 301 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 KIF13BQ9NQT8 1826 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 HTRA2O43464 458 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 KCNA5P22460 613 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PSMB9P28065 219 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TMED10P49755 219 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 CCR3P51677 355 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RPL38P63173 70 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 MYBPC1Q00872 1141 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PRKCQQ04759 706 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 NFE2Q16621 373 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CHSY3Q70JA7 882 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 LRRC8DQ7L1W4 858 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PLD3Q8IV08 490 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 LILRA2Q8N149 483 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PTCD2Q8WV60 388 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 LINGO1Q96FE5 620 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC45A3Q96JT2 553 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 NSUN5Q96P11 429 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 CDK15Q96Q40 435 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC2A13Q96QE2 648 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TMEM209Q96SK2 561 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ASPSCR1Q9BZE9 553 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ADAMTS10Q9H324 1103 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 ZFYVE28Q9HCC9 887 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 KLQ9UEF7 1012 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms