RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 AGAP3Q96P47 875 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 C2orf49Q9BVC5 232 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 G3V2T6 193 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ANXA5P08758 320 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 CPB1P15086 417 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 CEBPAP49715 358 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF280DQ6N043 979 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF773Q6PK81 442 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SYTL1Q8IYJ3 562 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF655Q8N720 491 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 FAM151AQ8WW52 585 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 C18orf25Q96B23 403 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MARK4Q96L34 752 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 NFKBIZQ9BYH8 718 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 LCP1P13796 627 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ANKRD26P1Q6NSI1 321 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 UBE2R2Q712K3 238 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PIH1D2Q8WWB5 315 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 CDCA5Q96FF9 252 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MRTO4Q9UKD2 239 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SHPRHQ149N8 1683 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 A0A1B0GVI7 797 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 DPYSL4O14531 572 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ZBTB14O43829 449 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SEMA3AQ14563 771 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TYW3Q6IPR3 259 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 QSOX2Q6ZRP7 698 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 KBTBD2Q8IY47 623 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 FITM2Q8N6M3 262 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 DPF3Q92784 378 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ATP13A1Q9HD20 1204 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TDRKHQ9Y2W6 561 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TFECO14948 347 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 CST1P01037 141 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 FGFR3P22607 806 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 GPC1P35052 558 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 NOS2P35228 1153 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 GRIK3Q13003 919 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ADGRF2Q8IZF7 708 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SLC4A11Q8NBS3 891 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 INO80EQ8NBZ0 244 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 RXFP2Q8WXD0 754 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 DIRAS2Q96HU8 199 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MTIF3Q9H2K0 278 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ABCG2Q9UNQ0 655 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SPATA31A3Q5VYP0 1347 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ANKDD1BA6NHY2 528 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 HSD17B2P37059 387 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 GMPSP49915 693 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PRKD1Q15139 912 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ALG3Q92685 438 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 RNPEPQ9H4A4 650 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SCUBE2Q9NQ36 999 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TNCP24821 2201 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 GMFGO60234 142 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PRLP01236 227 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 HLA-DPB1P04440 258 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PGRP06401 933 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 FAM163BP0C2L3 166 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 KIR3DL1P43629 444 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SLC7A2P52569 658 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ARFIP1P53367 373 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 NAGLUP54802 743 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MIIPQ5JXC2 388 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SLC26A9Q7LBE3 791 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TMC8Q8IU68 726 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TARS2Q9BW92 718 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 FAM49AQ9H0Q0 323 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MARCH7Q9H992 704 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 RC3H2Q9HBD1 1191 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 POMPQ9Y244 141 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 WDR27A2RRH5 827 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 RIIAD1A6NNX1 92 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PGK1P00558 417 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 HPGDP15428 266 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 YWHAQP27348 245 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 MIPP30301 263 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SLC47A2Q86VL8 602 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ECHDC2Q86YB7 292 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 ZFPM1Q8IX07 1006 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 STON2Q8WXE9 905 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 XKR8Q9H6D3 395 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 UXTQ9UBK9 157 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-202ENST00000357162 PCDHGB5Q9Y5G0 923 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 SMCHD1A6NHR9 2005 aa6.57□□□□□ -1.36
VPS13B-202ENST00000357162 TKTL1P51854 596 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ZRANB3Q5FWF4 1079 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SUSD4Q5VX71 490 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 POU5F2Q8N7G0 328 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 BTN2A2Q8WVV5 523 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CPXM1Q96SM3 734 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 PRKAG3Q9UGI9 489 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ANGPTL1O95841 491 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SPESP1Q6UW49 350 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ALG2Q9H553 416 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms