RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 TRIM60Q495X7 471 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 SFT2D3Q587I9 215 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 BNC2Q6ZN30 1099 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 RNF111Q6ZNA4 994 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 DET1Q7L5Y6 550 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ZNF366Q8N895 744 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 CALML6Q8TD86 181 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 MTFMTQ96DP5 389 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 FUBP3Q96I24 572 aaKnown RBP eCLIP15.32■□□□□ 0.041e-7■■■□□ 17
NEDD4L-202ENST00000356462 PRICKLE1Q96MT3 831 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 CD274Q9NZQ7 290 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 LMNAP02545 664 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 EEF1DP29692 281 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 POLE2P56282 527 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 POU4F1Q01851 419 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 DPF3Q92784 378 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 VPS33AQ96AX1 596 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ZNF184Q99676 751 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 MID2Q9UJV3 735 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 IKZF3Q9UKT9 509 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 CLEC4EQ9ULY5 219 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 RGSL1A5PLK6 1076 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 FFAR3O14843 346 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 GPR42O15529 346 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 SMAD6O43541 496 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 THRAP10827 490 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 MYL4P12829 197 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ATP6V1B1P15313 513 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ATP6V1C1P21283 382 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 DEFB103AP81534 67 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 TSTA3Q13630 321 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ANKS3Q6ZW76 656 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 NAT16Q8N8M0 369 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 CDYL2Q8N8U2 506 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■□□□□ 9.9
NEDD4L-202ENST00000356462 POLR3BQ9NW08 1133 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 NSMCE4AQ9NXX6 385 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 HACD3Q9P035 362 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 APPL1Q9UKG1 709 aa15.32■□□□□ 0.04
NEDD4L-202ENST00000356462 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 SYN3O14994 580 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 SMIM24O75264 130 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 STC2O76061 302 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 GDF5P43026 501 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 NDST2P52849 883 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CEACAM7Q14002 265 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 USP41Q3LFD5 358 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 IYDQ6PHW0 289 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 NET1Q7Z628 596 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 ISCA2Q86U28 154 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CEP70Q8NHQ1 597 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 S100A14Q9HCY8 104 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 ATG2BQ96BY7 2078 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 FAM149AA5PLN7 773 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 SDHDO14521 159 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 ETS2P15036 469 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 SH3BP2P78314 561 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 GRB7Q14451 532 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 TECRLQ5HYJ1 363 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 DNAJC14Q6Y2X3 702 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 FBXW8Q8N3Y1 598 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 DNAJB14Q8TBM8 379 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 RAB3IL1Q8TBN0 382 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 FAM110BQ8TC76 370 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CNBD2Q96M20 576 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CLIC5Q9NZA1 410 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CD84Q9UIB8 345 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 CPQQ9Y646 472 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 TRIOO75962 3097 aa15.31■□□□□ 0.04
NEDD4L-202ENST00000356462 OR6C75A6NL08 312 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 PIP5K1BO14986 540 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 MAGEC1O60732 1142 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 MTX2O75431 263 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 GABRR2P28476 465 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 STK19P49842 368 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 IL10RBQ08334 325 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 CDC16Q13042 620 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 UGT3A1Q6NUS8 523 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 EEF1AKMT1Q8WVE0 214 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 MIEF2Q96C03 454 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 CLSTN3Q9BQT9 956 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 MRPL1Q9BYD6 325 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 PIDD1Q9HB75 910 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 VPS45Q9NRW7 570 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 E7ENX8 843 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 PSMD12O00232 456 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 PRAMEF11O60813 436 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 TMCC1O94876 653 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 PGM3O95394 542 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 FAM163BP0C2L3 166 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 HOXD9P28356 352 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 YBX1P67809 324 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 DSG1Q02413 1049 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 AAK1Q2M2I8 961 aa15.3■□□□□ 0.04
NEDD4L-202ENST00000356462 SLC44A4Q53GD3 710 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms