RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ITIH5Q86UX2 942 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 AFAP1L2Q8N4X5 818 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 LINC01465Q8N7H1 131 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 C2CD4AQ8NCU7 369 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 FAM45AQ8TCE6 357 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PABPC5Q96DU9 382 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CENPNQ96H22 339 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 TNIP3Q96KP6 325 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 NEURL2Q9BR09 285 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SEMA4BQ9NPR2 832 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SACM1LQ9NTJ5 587 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 RBPJLQ9UBG7 517 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CPA4Q9UI42 421 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CSADQ9Y600 493 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 RAD54BQ9Y620 910 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 TTC3P53804 2025 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SYNCRIPO60506 623 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CBFA2T3O75081 653 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CYP2C9P11712 490 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 EIF2B2P49770 351 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CACNB2Q08289 660 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 NFYCQ13952 458 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ATP6AP1Q15904 470 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ARMCX2Q7L311 632 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TAC4Q86UU9 113 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF354CQ86Y25 554 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 HS3ST5Q8IZT8 346 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ZMIZ2Q8NF64 920 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TNIP2Q8NFZ5 429 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TWIST2Q8WVJ9 160 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SEPT8Q92599 483 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TOP1MTQ969P6 601 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 LRRC58Q96CX6 371 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SLC2A13Q96QE2 648 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CSF3RQ99062 836 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 C9orf16Q9BUW7 83 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SLC39A8Q9C0K1 460 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TUBB1Q9H4B7 451 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 INTS7Q9NVH2 962 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SMPD3Q9NY59 655 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 UBQLN1Q9UMX0 589 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CDK14O94921 469 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CCNA2P20248 432 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 PRDX3P30048 256 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 LIPEQ05469 1076 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CARTPTQ16568 116 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ARL13BQ3SXY8 428 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 C8orf82Q6P1X6 216 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 MFSD2AQ8NA29 543 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SNX19Q92543 992 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 PCED1BQ96HM7 432 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ABHD8Q96I13 439 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 GLT1D1Q96MS3 346 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 HNRNPABQ99729 332 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 C16orf70Q9BSU1 422 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ING2Q9H160 280 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 NSMCE4AQ9NXX6 385 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 FNDC3AQ9Y2H6 1198 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TRIM17Q9Y577 477 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 A0A087X1B8 175 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 NOL3O60936 208 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 BCL10O95999 233 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 GFAPP14136 432 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TCF3P15923 654 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 DCKP27707 260 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CAPGP40121 348 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 RPL34P49207 117 aaKnown RBP10.13□□□□□ -0.79
PTPRA-203ENST00000356147 PGFP49763 221 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 CCNA1P78396 465 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 GSTM4Q03013 218 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 FPGSQ05932 587 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 LAPTM5Q13571 262 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TIGD2Q4W5G0 525 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF678Q5SXM1 525 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TFAP2DQ7Z6R9 452 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 LINC00523Q86TU6 105 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ISCA2Q86U28 154 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 MIER2Q8N344 545 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 ACOX2Q99424 681 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SLC30A3Q99726 388 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 SEZ6LQ9BYH1 1024 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 LHPPQ9H008 270 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TBCCD1Q9NVR7 557 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 AASSQ9UDR5 926 aa10.13□□□□□ -0.79
PTPRA-203ENST00000356147 TMEM247A6NEH6 219 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 A8MU76 341 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 NCAM2O15394 837 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 INHBBP09529 407 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 CDH3P22223 829 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 ARL1P40616 181 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-203ENST00000356147 WNT3AP56704 352 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 DNAJB13P59910 316 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 POU4F1Q01851 419 aa10.12□□□□□ -0.79
PTPRA-203ENST00000356147 INTS11Q5TA45 600 aaKnown RBP10.12□□□□□ -0.79
PTPRA-203ENST00000356147 IGFN1Q86VF2 1251 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms