RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 SETD3Q86TU7 594 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 TSPAN33Q86UF1 283 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 TACO1Q9BSH4 297 aaKnown RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 LRRC3Q9BY71 257 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 OXSMQ9NWU1 459 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 SPEGQ15772 3267 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 NOTCH4Q99466 2003 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 TNRC18O15417 2968 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 PEX14O75381 377 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CA3P07451 260 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 RHOP08100 348 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CR2P20023 1033 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 KIRREL3Q8IZU9 778 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 KCNV2Q8TDN2 545 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 PTERQ96BW5 349 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 FNIP2Q9P278 1114 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 KIAA1671Q9BY89 1806 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 ATP6AP2A0A1C7CYW4 349 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 H3BMM5 538 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 STX7O15400 261 aaKnown RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 ATP6AP2O75787 350 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 RHOBTB1O94844 696 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 SORBS2O94875 1100 aaKnown RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 KLHL2O95198 593 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 GSTA1P08263 222 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 SERPINB5P36952 375 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 C5orf22Q49AR2 442 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 LILRA6Q6PI73 481 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 ASRGL1Q7L266 308 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CLDN19Q8N6F1 224 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 TADA1Q96BN2 335 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 WWP1Q9H0M0 922 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-202ENST00000356141 IKZF3Q9UKT9 509 aa17.62■□□□□ 0.41
NPAS3-202ENST00000356141 B2RBV5 119 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 ENTPD5O75356 428 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 SRP72O76094 671 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 CLDN7O95471 211 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 LEPRP48357 1165 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 PTPRNQ16849 979 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 SH2D4BQ5SQS7 431 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 Q6ZNB5 142 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 ZSWIM9Q86XI8 627 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 MRPL43Q8N983 215 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 SIDT2Q8NBJ9 832 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 SLC45A3Q96JT2 553 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 MFSD1Q9H3U5 465 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 CD84Q9UIB8 345 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 PTGDR2Q9Y5Y4 395 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 UBXN8O00124 270 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 GYG2O15488 501 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 NDUFS3O75489 264 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 ZNF189O75820 626 aaPredicted RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 PDAP1Q13442 181 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 CAMK1Q14012 370 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 INSCQ1MX18 579 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 PAQR3Q6TCH7 311 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 ADGRD2Q7Z7M1 963 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 SPPL3Q8TCT6 385 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 BOCQ9BWV1 1114 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 NSMCE4AQ9NXX6 385 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 KCNK4Q9NYG8 393 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 NCKIPSDQ9NZQ3 722 aa17.61■□□□□ 0.41
NPAS3-202ENST00000356141 APOBEC2Q9Y235 224 aaKnown RBP17.61■□□□□ 0.41
NPAS3-202ENST00000356141 CHD5Q8TDI0 1954 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 C1orf232A0A0U1RR37 186 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 LINC01553A4QN01 128 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 C2orf81A6NN90 581 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 BMPR1AP36894 532 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 ZYG11AQ6WRX3 759 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 TRIM67Q6ZTA4 783 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 CHST9Q7L1S5 443 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 CALML6Q8TD86 181 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 PTCD2Q8WV60 388 aaKnown RBP17.6■□□□□ 0.41
NPAS3-202ENST00000356141 USP13Q92995 863 aaPredicted RBP17.6■□□□□ 0.41
NPAS3-202ENST00000356141 ISL2Q96A47 359 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 ALG14Q96F25 216 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 RAD9AQ99638 391 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 GIMAP2Q9UG22 337 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 COL6A3P12111 3177 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 SLC7A4O43246 635 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 SUPT7LO94864 414 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 TGDSO95455 350 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 ATP6V1G2O95670 118 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 PBX2P40425 430 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 VIPR2P41587 438 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 CLCN4P51793 760 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 SLC25A3Q00325 362 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 MESP2Q0VG99 397 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 SPDYAQ5MJ70 313 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 LIPMQ5VYY2 423 aa17.6■□□□□ 0.41
NPAS3-202ENST00000356141 Q6ZVU0 165 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms