RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DDX6P26196 483 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ADARP55265 1226 aaKnown RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 GPR158Q5T848 1215 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 RAD9BQ6WBX8 426 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 TREML1Q86YW5 311 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 CLIP4Q8N3C7 705 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 GFM1Q96RP9 751 aaKnown RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 C3orf14Q9HBI5 128 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 RXFP1Q9HBX9 757 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 DUSP4Q13115 394 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ITIH4Q14624 930 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 SLC9A9Q8IVB4 645 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 UBE2J2Q8N2K1 259 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 SNX33Q8WV41 574 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 LINGO1Q96FE5 620 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 EXD2Q9NVH0 621 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 CD84Q9UIB8 345 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 TRHDEQ9UKU6 1024 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 RB1P06400 928 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 EPHX1P07099 455 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 CDC25CP30307 473 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 GRK5P34947 590 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 B3GNT4Q9C0J1 378 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 TKTP29401 623 aaKnown RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 TROAPQ12815 778 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 FOXRED2Q8IWF2 684 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ZSCAN5BA6NJL1 495 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 GSC2O15499 205 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 SERPINE1P05121 402 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 THOC7Q6I9Y2 204 aaKnown RBP17.25■□□□□ 0.35
COL27A1-201ENST00000356083 MAP4K5Q9Y4K4 846 aa17.25■□□□□ 0.35
COL27A1-201ENST00000356083 ITGA2P17301 1181 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SMIM11AP58511 58 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL27A1-201ENST00000356083 TRMT5Q32P41 509 aaKnown RBP17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ADAMTS15Q8TE58 950 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 TBATAQ96M53 351 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 C22orf31O95567 290 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CYP3A4P08684 503 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CNTN2Q02246 1040 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 PTPRNQ16849 979 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SLC8B1Q6J4K2 584 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CD101Q93033 1021 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 KCNE2Q9Y6J6 123 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CCNDBP1O95273 360 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 HGFP14210 728 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SLC26A2P50443 739 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 HFE2Q6ZVN8 426 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ANKS1BQ7Z6G8 1248 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ZMIZ2Q8NF64 920 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF606Q8WXB4 792 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 MYDGFQ969H8 173 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 POPDC2Q9HBU9 364 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CRNNQ9UBG3 495 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-201ENST00000356083 FBXW2Q9UKT8 454 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 VSTM5A8MXK1 200 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 XKR4Q5GH76 650 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CPA6Q8N4T0 437 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 DEFB119Q8N690 84 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 A8MUA0 341 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 E2F3O00716 465 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 CLDN4O14493 209 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 FUT4P22083 530 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ITPKAP23677 461 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 BEND5Q7L4P6 421 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 AMER2Q8N7J2 671 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ZSCAN5CA6NGD5 496 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-201ENST00000356083 PIAS1O75925 651 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 GNSP15586 552 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SLC7A1P30825 629 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ERVK-24P63145 666 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 C1orf216Q8TAB5 229 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ZSCAN5AQ9BUG6 496 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 DNPEPQ9ULA0 475 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 STBD1O95210 358 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ALPPL2P10696 532 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 ALG10Q5BKT4 473 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 SLC25A25Q6KCM7 469 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 RIPOR3Q96MK2 946 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 IL22Q9GZX6 179 aa17.24■□□□□ 0.35
COL27A1-201ENST00000356083 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
COL27A1-201ENST00000356083 MDC1Q14676 2089 aaKnown RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 AHCYL1O43865 530 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CALCAP01258 141 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 LAMP2P13473 410 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 STOX1Q6ZVD7 989 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CPT1CQ8TCG5 803 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SLC47A1Q96FL8 570 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF224Q9NZL3 707 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 MDM4O15151 490 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 MAGEA2P43356 314 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CXCR3P49682 368 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms