RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KDELR1P24390 212 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 UGT2B10P36537 528 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 GMPRP36959 345 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 NCS1P62166 190 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 MFSD13AQ14CX5 517 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 LCN8Q6JVE9 175 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 MCUQ8NE86 351 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 HMGCLL1Q8TB92 370 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 SLC7A14Q8TBB6 771 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 MCEEQ96PE7 176 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 LPIN3Q9BQK8 851 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 ROGDIQ9GZN7 287 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■□□□□ 8.9
RTN3-205ENST00000356000 CHRAC1Q9NRG0 131 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 TAS2R9Q9NYW1 312 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 COQ3Q9NZJ6 369 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 CPSF3Q9UKF6 684 aaKnown RBP15.74■□□□□ 0.11
RTN3-205ENST00000356000 PCDHGB1Q9Y5G3 927 aa15.74■□□□□ 0.11
RTN3-205ENST00000356000 TCRBV5S1A1TA0A578 114 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 MAGEB16A2A368 324 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 CDK14O94921 469 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 SNHG28P0DPA3 235 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 TYK2P29597 1187 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 OXTRP30559 389 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 TFAMQ00059 246 aaKnown RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 PRKAA1Q13131 559 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 ACOX1Q15067 660 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 IMPG1Q17R60 797 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 LEXMQ3ZCV2 418 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 IGSF11Q5DX21 431 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 TAF2Q6P1X5 1199 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 DPY19L3Q6ZPD9 716 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 USP37Q86T82 979 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 C8orf59Q8N0T1 100 aaPredicted RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 CHDHQ8NE62 594 aaPredicted RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 ACCSQ96QU6 501 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 NODALQ96S42 347 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 REXO4Q9GZR2 422 aaKnown RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 SLC17A6Q9P2U8 582 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.73■□□□□ 0.11
RTN3-205ENST00000356000 MSH4O15457 936 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 SNX4O95219 450 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 NPTX2P47972 431 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 CDK8P49336 464 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 PRIM2P49643 509 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 ZNF33BQ06732 778 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 TOP3AQ13472 1001 aaPredicted RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 ZNF404Q494X3 552 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 LETMD1Q6P1Q0 360 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 TBPL2Q6SJ96 375 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 LIX1LQ8IVB5 337 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 PELI3Q8N2H9 469 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 MPP5Q8N3R9 675 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 OR4M1Q8NGD0 313 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 ELMO2Q96JJ3 720 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 PHOX2BQ99453 314 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 IARS2Q9NSE4 1012 aaKnown RBP15.73■□□□□ 0.11
RTN3-205ENST00000356000 B3GNT2Q9NY97 397 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 ZDHHC2Q9UIJ5 367 aa15.73■□□□□ 0.11
RTN3-205ENST00000356000 MRASO14807 208 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PIGNO95427 931 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 ALOX12P18054 663 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 DNAJB1P25685 340 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 ST13P50502 369 aaKnown RBP15.72■□□□□ 0.11
RTN3-205ENST00000356000 AP3B2Q13367 1082 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 STARD3Q14849 445 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 ZIK1Q3SY52 487 aaPredicted RBP15.72■□□□□ 0.11
RTN3-205ENST00000356000 KCNT1Q5JUK3 1230 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 ZBTB33Q86T24 672 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 RFX6Q8HWS3 928 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 CBWD2Q8IUF1 395 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PARP16Q8N5Y8 322 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 MARC2Q969Z3 335 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 SNX15Q9NRS6 342 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 MTMR10Q9NXD2 777 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 TYW5A2RUC4 315 aaKnown RBP15.72■□□□□ 0.11
RTN3-205ENST00000356000 SLC4A1P02730 911 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 GPIP06744 558 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 KRT19P08727 400 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 IFI30P13284 250 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 MAPK12P53778 367 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
RTN3-205ENST00000356000 GRTP1Q5TC63 336 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 AMIGO1Q86WK6 493 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PLCZ1Q86YW0 608 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PLD6Q8N2A8 252 aaKnown RBP15.72■□□□□ 0.11
RTN3-205ENST00000356000 ANKRD52Q8NB46 1076 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PI4K2AQ9BTU6 479 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 PRDM8Q9NQV8 689 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 CYP26B1Q9NR63 512 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 GABBR1Q9UBS5 961 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 SLC9A2Q9UBY0 812 aa15.72■□□□□ 0.11
RTN3-205ENST00000356000 METTL15A6NJ78 407 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 FAM86B1E9PN63 330 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms