RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 PLEKHG7Q6ZR37 379 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 OTOP3Q7RTS5 596 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 LINC00523Q86TU6 105 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 OR6B3Q8NGW1 331 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 EXT2Q93063 718 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 CCDC90BQ9GZT6 254 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 FZD8Q9H461 694 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 NOL6Q9H6R4 1146 aaKnown RBP18.9■□□□□ 0.62
PRPF39-201ENST00000355765 IGSF5Q9NSI5 407 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 TMA7Q9Y2S6 64 aaKnown RBP18.9■□□□□ 0.62
PRPF39-201ENST00000355765 PEX10O60683 326 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 FARP2O94887 1054 aaPredicted RBP18.9■□□□□ 0.62
PRPF39-201ENST00000355765 ERCC2P18074 760 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 DNAJB13P59910 316 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 SLC13A2Q13183 592 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 ACAP2Q15057 778 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 RNF19BQ6ZMZ0 732 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 ARMCX6Q7L4S7 300 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 CLEC4FQ8N1N0 589 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 ZMAT2Q96NC0 199 aaKnown RBP18.9■□□□□ 0.62
PRPF39-201ENST00000355765 C2orf40Q9H1Z8 148 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 CXCL16Q9H2A7 254 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 EXD2Q9NVH0 621 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 HACD3Q9P035 362 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 NDUFAF1Q9Y375 327 aa18.9■□□□□ 0.62
PRPF39-201ENST00000355765 TCRBV5S2A0A599 114 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 MAGEB16A2A368 324 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 PTGES3LE9PB15 166 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 H3BMM5 538 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 PPP6CO00743 305 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 GSTM2P28161 218 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 BCAT1P54687 386 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 IFITM2Q01629 132 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 CLPPQ16740 277 aaPredicted RBP18.89■□□□□ 0.61
PRPF39-201ENST00000355765 DPY19L1Q2PZI1 675 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 TECRLQ5HYJ1 363 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 CATSPER4Q7RTX7 472 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 KDELC2Q7Z4H8 507 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 NPWQ8N729 165 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 SPATA22Q8NHS9 363 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 NDNFQ8TB73 568 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 VPS33AQ96AX1 596 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 KCTD14Q9BQ13 255 aaPredicted RBP18.89■□□□□ 0.61
PRPF39-201ENST00000355765 CHID1Q9BWS9 393 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ALOXE3Q9BYJ1 711 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ALG2Q9H553 416 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 NADKO95544 446 aaPredicted RBP18.89■□□□□ 0.61
PRPF39-201ENST00000355765 UGT2B4P06133 528 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 AGXTP21549 392 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ATAD3BQ5T9A4 648 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ZNF470Q6ECI4 717 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 STK32CQ86UX6 486 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 EVLQ9UI08 416 aaPredicted RBP18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ENPP5Q9UJA9 477 aa18.89■□□□□ 0.61
PRPF39-201ENST00000355765 ZNF214Q9UL59 606 aaPredicted RBP18.89■□□□□ 0.61
PRPF39-201ENST00000355765 JCHAINP01591 159 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 CA8P35219 290 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 RBP5P82980 135 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 LIPEQ05469 1076 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MBTD1Q05BQ5 628 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 CTF1Q16619 201 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 ZNF789Q5FWF6 425 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 FAM160B1Q5W0V3 765 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MFSD4AQ8N468 514 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 TTC30BQ8N4P2 665 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MINDY1Q8N5J2 469 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 OTUD5Q96G74 571 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 GSTO2Q9H4Y5 243 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MRGBPQ9NV56 204 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRPF39-201ENST00000355765 NSMCE4AQ9NXX6 385 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 PCDHGA11Q9Y5H2 935 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 DCLK1O15075 740 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 NOS2P35228 1153 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 CDH17Q12864 832 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 PAFAH1B3Q15102 231 aaKnown RBP18.88■□□□□ 0.61
PRPF39-201ENST00000355765 ARL13BQ3SXY8 428 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 THAP5Q7Z6K1 395 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 TBC1D21Q8IYX1 336 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 SCML4Q8N228 414 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 SDCCAG3Q96C92 435 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 MAGED4Q96JG8 741 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 TNFSF13BQ9Y275 285 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 PCDHGA8Q9Y5G5 932 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 SCN1AP35498 2009 aa18.88■□□□□ 0.61
PRPF39-201ENST00000355765 BBIP1A8MTZ0 92 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 ARSFP54793 590 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 ECT2LQ008S8 904 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 NFYCQ13952 458 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 ANKRD34AQ69YU3 496 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 PRMT9Q6P2P2 845 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 STRADAQ7RTN6 431 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 TMEM125Q96AQ2 219 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 HDAC11Q96DB2 347 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 GMIPQ9P107 970 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 PCDHB3Q9Y5E6 796 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 ZBTB42B2RXF5 422 aa18.87■□□□□ 0.61
PRPF39-201ENST00000355765 H0YAE9 185 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms