RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TNFAIP8L3Q5GJ75 292 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 SERPINA13PQ6UXR4 307 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 VANGL1Q8TAA9 524 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TSEN15Q8WW01 171 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 ACSS3Q9H6R3 686 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 BLOC1S4Q9NUP1 217 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PNPOQ9NVS9 261 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 NKIRAS2Q9NYR9 191 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TBC1D24Q9ULP9 559 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 GRIP1Q9Y3R0 1128 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 NUDT17P0C025 328 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 GOT1P17174 413 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 IGFALSP35858 605 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 EARS2Q5JPH6 523 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 RAB43Q86YS6 212 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 OR10G6Q8NH81 332 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 FATE1Q969F0 183 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 MCMBPQ9BTE3 642 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 KCNN2Q9H2S1 579 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 AGO1Q9UL18 857 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 PCDHGB3Q9Y5G1 929 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 EML1O00423 815 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 MTHFRP42898 656 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 STXBP1P61764 594 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 IKBKEQ14164 716 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 RUNDC3AQ59EK9 446 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 MSANTD1Q6ZTZ1 278 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 PARGQ86W56 976 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 HTRA1Q92743 480 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 RNF31Q96EP0 1072 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CHCHD6Q9BRQ6 235 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 AARSD1Q9BTE6 412 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 RNF17Q9BXT8 1623 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 A0A0J9YYE9 177 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 NPEPPSL1A6NEC2 478 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 TISP43B9A030 160 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CXCL11O14625 94 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CCNKO75909 580 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CBX3Q13185 183 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 EIF2S3LQ2VIR3 472 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 C9orf131Q5VYM1 1079 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 FAM47BQ8NA70 645 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 SGK2Q9HBY8 427 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 ATXN10Q9UBB4 475 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 SNX7Q9UNH6 387 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 NCOA3Q9Y6Q9 1424 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 AP2A2O94973 939 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 ERBB2P04626 1255 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 HDCP19113 662 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 ITPKBP27987 946 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 ENPEPQ07075 957 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 PEX6Q13608 980 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 PLET1Q6UQ28 207 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 ZNF730Q6ZMV8 503 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 NOL11Q9H8H0 719 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 IL17RBQ9NRM6 502 aa14.87□□□□□ -0.03
LMX1B-201ENST00000355497 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
LMX1B-201ENST00000355497 FAM240BA0A1B0GVZ2 78 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 TEX46H3BTG2 121 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 TIPRLO75663 272 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 TRBC1P01850 177 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 CYP3A4P08684 503 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PSMD5Q16401 504 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 FAM46CQ5VWP2 391 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 IQSEC1Q6DN90 963 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 CXorf57Q6NSI4 855 aaKnown RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 RTL4Q6ZR62 310 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 GALNT5Q7Z7M9 940 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 FAM83AQ86UY5 434 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PHF13Q86YI8 300 aaPredicted RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PEX5LQ8IYB4 626 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PRRG4Q9BZD6 226 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PDP1Q9P0J1 537 aaPredicted RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 DKK3Q9UBP4 350 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ATP6AP2A0A1C7CYW4 349 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ATP6AP2O75787 350 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 FGF1P05230 155 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 UBE2R2Q712K3 238 aaPredicted RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 SLC16A10Q8TF71 515 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 C11orf24Q96F05 449 aaPredicted RBP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ASF1AQ9Y294 204 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 TRAF6Q9Y4K3 522 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ADCYAP1R1P41586 468 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 FAM151BQ6UXP7 276 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ZNF558Q96NG5 402 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 ABCB9Q9NP78 766 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 IKZF2Q9UKS7 526 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 FAM172BPA6NC97 362 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 RGS10O43665 173 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 TGDSO95455 350 aa14.86□□□□□ -0.03
LMX1B-201ENST00000355497 IL1BP01584 269 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms