RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 LRRC3BQ96PB8 259 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 RIT2Q99578 217 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 C1QTNF6Q9BXI9 259 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 KLQ9UEF7 1012 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 SNX11Q9Y5W9 270 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 STAB1Q9NY15 2570 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 SMIM28A0A1B0GU29 152 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 CREB3O43889 395 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 PRLP01236 227 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 MATN1P21941 496 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 GARTP22102 1010 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 ELK4P28324 431 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 GCKP35557 465 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 TUBB4BP68371 445 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 CTU2Q2VPK5 515 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 STPG1Q5TH74 334 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 AGBL2Q5U5Z8 902 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 MAMSTRQ6ZN01 415 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 CCDC121Q6ZUS5 278 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 MRPL10Q7Z7H8 261 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 ZNF605Q86T29 641 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 PHACTR4Q8IZ21 702 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 OR6J1Q8NGC5 347 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 MYCBPQ99417 103 aaPredicted RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 FAM126AQ9BYI3 521 aaPredicted RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 NRDE2Q9H7Z3 1164 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 PAPOLBQ9NRJ5 636 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 BTRCQ9Y297 605 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 USH1CQ9Y6N9 552 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 CCDC188H7C350 402 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 LILRB5O75023 590 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 MITFO75030 526 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 FKBP6O75344 327 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMAD4Q13485 552 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 CLLU1OSQ5K130 101 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 KLHL35Q6PF15 583 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 BNIPLQ7Z465 357 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 IFNEQ86WN2 208 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 FAM217AQ8IXS0 508 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 ZNF683Q8IZ20 524 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GPD1LQ8N335 351 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMAP2Q8WU79 429 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 CASP10Q92851 521 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 NIFKQ9BYG3 293 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 BCO2Q9BYV7 579 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMG9Q9H0W8 520 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 ARHGEF38Q9NXL2 777 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 KIAA1522Q9P206 1035 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 DNAJC15Q9Y5T4 150 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SAC3D1A6NKF1 404 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 EIF3DO15371 548 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD47-201ENST00000355354 DYNC1LI2O43237 492 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 PSMG1O95456 288 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 ANPEPP15144 967 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 PRKCHP24723 683 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GSSP48637 474 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SNRPD1P62314 119 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 ZXDAP98168 799 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 DDR2Q16832 855 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 XKR4Q5GH76 650 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 TSHZ1Q6ZSZ6 1077 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 RALGPS2Q86X27 583 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 FRS2Q8WU20 508 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 WSB2Q9NYS7 404 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 SHOC2Q9UQ13 582 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 ARL2BPQ9Y2Y0 163 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 COPG1Q9Y678 874 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 C2orf78A6NCI8 922 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 WDR64B1ANS9 1081 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 H3BRB1 525 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMAD6O43541 496 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 XPOTO43592 962 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 GBAP04062 536 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 CDH2P19022 906 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 EPORP19235 508 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 PSMA2P25787 234 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 CRYMQ14894 314 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 OR4D1Q15615 310 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 RFTN2Q52LD8 501 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 LYSMD3Q7Z3D4 306 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 ITIH5Q86UX2 942 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD47-201ENST00000355354 ENDOVQ8N8Q3 282 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 HLA-CQ95604 372 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 CDRT15Q96T59 188 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 TUFT1Q9NNX1 390 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GPATCH2Q9NW75 528 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 TMPRSS11EQ9UL52 423 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 FRMD4BQ9Y2L6 1034 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMIM35A0A1B0GVV1 85 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GCM2O75603 506 aaPredicted RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 TOM1L1O75674 476 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 JCHAINP01591 159 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 NUDT7P0C024 238 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GSTT1P30711 240 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 NSFP46459 744 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 YWHAGP61981 247 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD47-201ENST00000355354 RPS24P62847 133 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms