RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PRAMEF10O60809 474 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 IFNA7P01567 189 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 RLN1P04808 185 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 TGFB3P10600 412 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 NR4A1P22736 598 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 FSTL1Q12841 308 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 CTBP1Q13363 440 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 IPCEF1Q8WWN9 437 aaPredicted RBP12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 HIPK3Q9H422 1215 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 MAN2B2Q9Y2E5 1009 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 POLR1DQ9Y2S0 133 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 PTPRMP28827 1452 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR5F1O95221 314 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC7A1P30825 629 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 CD86P42081 329 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 CDH4P55283 916 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 OGFOD2Q6N063 350 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 OR52K2Q8NGK3 314 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 HAS1Q92839 578 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC7A8Q9UHI5 535 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 TLL2Q9Y6L7 1015 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 ANKDD1BA6NHY2 528 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 SMIM22K7EJ46 135 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 REM1O75628 298 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 EPORP19235 508 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 MERTKQ12866 999 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 LYPLAL1Q5VWZ2 237 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 PRR23CQ6ZRP0 262 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 UNC5BQ8IZJ1 945 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 INTS10Q9NVR2 710 aaKnown RBP12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 PCDHB7Q9Y5E2 793 aa12.71□□□□□ -0.38
SYNCRIP-201ENST00000355238 MOGQ16653 247 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 LSM12Q3MHD2 195 aaKnown RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 RNASEH2BQ5TBB1 312 aaKnown RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 EFCAB9A8MZ26 197 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 IGSF6O95976 241 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 LRG1P02750 347 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ENO2P09104 434 aaPredicted RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 SNAPC2Q13487 334 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC27A1Q6PCB7 646 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 FAM53CQ9NYF3 392 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 GRHL1Q9NZI5 618 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 CPS1P31327 1500 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 FAM25EA8MYX2 175 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 TEX28O15482 410 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 PLIN3O60664 434 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 NR2F1P10589 423 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 MPP5Q8N3R9 675 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 PSME2Q9UL46 239 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 E9PCH4 1651 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCRL2O00421 344 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 CALCAP01258 141 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 CYP2A6P11509 494 aaPredicted RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 CXCR2P25025 360 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC18A1P54219 525 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 RIPPLY1Q0D2K3 151 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ARL13AQ5H913 290 aaPredicted RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 VWA5B1Q5TIE3 1220 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 FAIM2Q9BWQ8 316 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 NEK6Q9HC98 313 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 GNB5O14775 395 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 FAM155BO75949 473 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 DLG2Q15700 870 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTPRNQ16849 979 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 TTYH3Q9C0H2 523 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 TAS2R7Q9NYW3 318 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM9Q9P0T7 183 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 NKX1-2Q9UD57 310 aaPredicted RBP12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 MKLN1Q9UL63 735 aa12.7□□□□□ -0.38
SYNCRIP-201ENST00000355238 PCSK2P16519 638 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 OGNP20774 298 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 FOXN2P32314 431 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 HADHBP55084 474 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 NFIAQ12857 509 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PLEKHG6Q3KR16 790 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SNCAIPQ9Y6H5 919 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AP3D1O14617 1153 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 CDH13P55290 713 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AP1S2P56377 157 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ARF5P84085 180 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 BIKQ13323 160 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZACNQ401N2 412 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms