RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CAB39Q9Y376 341 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-201ENST00000352993 PCDHB3Q9Y5E6 796 aa7.64□□□□□ -1.19
BRCA1-201ENST00000352993 PTPRFP10586 1907 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 A8MV72 311 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 VWA5AO00534 786 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NPHS1O60500 1241 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 STBD1O95210 358 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GSTM2P28161 218 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 MAGEA12P43365 314 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PSMD8P48556 350 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GSK3BP49841 420 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 SULT1E1P49888 294 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TAS2R39P59534 338 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 IFITM2Q01629 132 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 FAM209AQ5JX71 171 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 EEF1DP3Q658K8 133 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 XAF1Q6GPH4 301 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PRMT9Q6P2P2 845 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ZPBP2Q6X784 338 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 RALGPS2Q86X27 583 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PELI3Q8N2H9 469 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ATP6V0D2Q8N8Y2 350 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 C1orf127Q8N9H9 656 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 OR7G1Q8NGA0 311 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 DUS3LQ96G46 650 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NSMCE2Q96MF7 247 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GPR22Q99680 433 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 COQ7Q99807 217 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TOR3AQ9H497 397 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PDZD7Q9H5P4 517 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 SMURF2Q9HAU4 748 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LRRC4Q9HBW1 653 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GBA2Q9HCG7 927 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 AKIP1Q9NQ31 210 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NRBP2Q9NSY0 501 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CPSF3Q9UKF6 684 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NUDT5Q9UKK9 219 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TIMM22Q9Y584 194 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LINC00854A0A1B0GVQ3 168 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PDZK1P1A8MUH7 402 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF99A8MXY4 864 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ZBTB24O43167 697 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 B4GALT5O43286 388 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 XPNPEP2O43895 674 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 HS6ST1O60243 411 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TOMM70O94826 608 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LRIG2O94898 1065 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PGK1P00558 417 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PIGRP01833 764 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.195e-6■■■□□ 15.8
BRCA1-201ENST00000352993 CRHBPP24387 322 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GTF2E2P29084 291 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 HADHAP40939 763 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ARSFP54793 590 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NCS1P62166 190 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CCNA1P78396 465 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 DPYSL2Q16555 572 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 AMHR2Q16671 573 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 UGP2Q16851 508 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ATF7IP2Q5U623 682 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 VSIG10LQ86VR7 867 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PEX5LQ8IYB4 626 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ELMOD1Q8N336 334 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 OR6B3Q8NGW1 331 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NDRG1Q92597 394 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TMBIM1Q969X1 311 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LRRC58Q96CX6 371 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GPRASP2Q96D09 838 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CEP295NLQ96MC4 621 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CDK5RAP1Q96SZ6 601 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 MRPL57Q9BQC6 102 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LPIN3Q9BQK8 851 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 OSBPL2Q9H1P3 480 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 EIF2B3Q9NR50 452 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 HACD3Q9P035 362 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GMIPQ9P107 970 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ENPP5Q9UJA9 477 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 USP22Q9UPT9 525 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 BTRCQ9Y297 605 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GPSM3Q9Y4H4 160 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 RBBP6Q7Z6E9 1792 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 EEF2KO00418 725 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 DYRK3O43781 588 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 UGT2B11O75310 529 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 GJB1P08034 283 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 KCNA2P16389 499 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 NFKB1P19838 968 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 KCNA5P22460 613 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ARL2P36404 184 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 APLP1P51693 650 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 SNX16P57768 344 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 KCNK10P57789 538 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 LRIT3Q3SXY7 679 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 C6orf141Q5SZD1 244 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TTC23Q5W5X9 447 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 BNIPLQ7Z465 357 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF784Q8NCA9 323 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms