RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KRT19P08727 400 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 THRBP10828 461 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 WEE1P30291 646 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 MAP2K4P45985 399 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 LIMK2P53671 638 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 SEMA5AQ13591 1074 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 TBRG1Q3YBR2 411 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 DCAF4Q8WV16 495 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 RORBQ92753 470 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 GTF2H4Q92759 462 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 FCRL3Q96P31 734 aaPredicted RBP13.25□□□□□ -0.29
IFT88-202ENST00000351808 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
IFT88-202ENST00000351808 AGAP5A6NIR3 686 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 C9JVG2 144 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 DLX3O60479 287 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 SEMA3DO95025 777 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 GPIP06744 558 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 RBP1P09455 135 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 BMP1P13497 986 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 BDNFP23560 247 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 CD47Q08722 323 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 LAIR2Q6ISS4 152 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 STK32CQ86UX6 486 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 ISL2Q96A47 359 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 LGALS12Q96DT0 336 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 PSKH2Q96QS6 385 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 GDF15Q99988 308 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 ZNF518BQ9C0D4 1074 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 TOR3AQ9H497 397 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 CMTM6Q9NX76 183 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 MAP10Q9P2G4 905 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 ZNF639Q9UID6 485 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 WBP11Q9Y2W2 641 aaKnown RBP13.25□□□□□ -0.29
IFT88-202ENST00000351808 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 CPNE3O75131 537 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 BBOX1O75936 387 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 APOA1P02647 267 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 SERPINH1P50454 418 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 HSDL1Q3SXM5 330 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 CNSTQ6PJW8 725 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 HACD2Q6Y1H2 254 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 FUNDC1Q8IVP5 155 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 TBC1D21Q8IYX1 336 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 DPF3Q92784 378 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ELMO2Q96JJ3 720 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ACAT2Q9BWD1 397 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 NPAP1Q9NZP6 1156 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 OPTCQ9UBM4 332 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 RUVBL2Q9Y230 463 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 TNRC6CQ9HCJ0 1690 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 LRIG2O94898 1065 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 CHRM3P20309 590 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 UQCRC1P31930 480 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 GGT5P36269 586 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 DDOSTP39656 456 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 CLDN10P78369 228 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 UGCGQ16739 394 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 SCYL2Q6P3W7 929 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 STON2Q8WXE9 905 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 RNF170Q96K19 258 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ZSCAN5AQ9BUG6 496 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 FBRSL1Q9HCM7 1045 aaKnown RBP13.24□□□□□ -0.29
IFT88-202ENST00000351808 ACOXLQ9NUZ1 547 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
IFT88-202ENST00000351808 ATP6AP2A0A1C7CYW4 349 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CCDC154A6NI56 674 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ATP6AP2O75787 350 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 DNAJB5O75953 348 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 PRKD3O94806 890 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 ITGB6P18564 788 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CYP2A7P20853 494 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 YWHAQP27348 245 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 PSMB9P28065 219 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ALDH3A2P51648 485 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 AP2S1P53680 142 aaPredicted RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 EVA1CP58658 441 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 PRKCEQ02156 737 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 GBE1Q04446 702 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 SPP2Q13103 211 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 TYSND1Q2T9J0 566 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 KCTD20Q7Z5Y7 419 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms